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Summary Expression Phenotypes Gene Literature (24) GO Terms (98) Nucleotides (194) Proteins (65) Interactants (461) Wiki
XB-GENEPAGE-977112

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for fmr1 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (24)
Models - mRNA (36)
mRNAs (3)
ESTs (39)

RefSeq mRNAs (2)

Accession Version Protein Name Length Protein Species
NM_001005454 NM_001005454.1 fragile X messenger ribonucleoprotein 1 homolog 2330 bp NP_001005454 X. tropicalis
XM_012968194 XM_012968194.3 synaptic functional regulator FMR1 isoform X1 4532 bp XP_012823648 X. tropicalis

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g013756 X. tropicalis
ENSEMBL 10.0 soho1 X. tropicalis
Xenbase 9.1 gene968 X. tropicalis
ENSEMBL 9.1 fmr1 X. tropicalis
JGI 7.1 Xetro.H00703 X. tropicalis
ENSEMBL 4.1 ENSXETG00000019647 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1020013 X. tropicalis
JGI 4.1 e_gw1.102.72.1 X. tropicalis
JGI 4.1 e_gw1.102.73.1 X. tropicalis
JGI 4.1 e_gw1.102.90.1 X. tropicalis
JGI 4.1 gw1.102.72.1 X. tropicalis
JGI 4.1 gw1.102.73.1 X. tropicalis
JGI 4.1 gw1.102.90.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1020025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1020072 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1020073 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1020090 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1020008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1020064 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1020065 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_102000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_102000064 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_102000065 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_102000013 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.0 mRNA068034 X. tropicalis
ENSEMBL 10.0 ENSXETT00000042153 X. tropicalis
ENSEMBL 10.0 ENSXETT00000042520 X. tropicalis
Xenbase 9.1 rna3099 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068642 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077326 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066672 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066580 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095520 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100324 X. tropicalis
ENSEMBL 9.1 ENSXETT00000042153 X. tropicalis
ENSEMBL 9.1 ENSXETT00000042520 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067820 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084379 X. tropicalis
JGI 7.1 Xetro.H00703.2 X. tropicalis
JGI 7.1 Xetro.H00703.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1020013 X. tropicalis
ENSEMBL 4.1 ENSXETT00000042153 X. tropicalis
ENSEMBL 4.1 ENSXETT00000042520 X. tropicalis
JGI 4.1 e_gw1.102.72.1 X. tropicalis
JGI 4.1 e_gw1.102.73.1 X. tropicalis
JGI 4.1 e_gw1.102.90.1 X. tropicalis
JGI 4.1 gw1.102.72.1 X. tropicalis
JGI 4.1 gw1.102.73.1 X. tropicalis
JGI 4.1 gw1.102.90.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1020025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1020072 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1020073 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1020090 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1020008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1020064 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1020065 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_102000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_102000064 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_102000065 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_102000013 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
NM_001005454 X. tropicalis
IMAGE:5336511 BC074570 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
XM_012968194 X. tropicalis

ESTs (39)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8890908 EL851389 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8956038 EL662626 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8958596 EL660728 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8950635 EG655740 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
CABC4439 DR833278 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7791004 CX324643 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625424 CX378685 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7617704 CX362639 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7594725 CX332055 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7577704 CX423564 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576512 CX431964 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550111 CX485857 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7791790 DR906407 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7754165 DN055659 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7737402 DN024815 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7717211 CX978583 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7660837 CX841515 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7525072 CX439919 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA006o16 CR410550 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas142j01 AL971863 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu131j01 AL792813 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5336511 BQ522404 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8890908 EL851390 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
CABC4439 DR833277 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7550111 CX485856 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7660837 CX841514 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7791004 DR905817 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7754165 DN055658 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7737402 DN024814 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7717211 CX978582 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7576512 CX431963 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577704 CX423563 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7625424 CX378684 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7791790 CX340535 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7594725 CX332054 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA006o16 CR410551 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas142j01 BX757957 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu131j01 BX697701 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5336511 BQ522403 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27