Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (2) GO Terms (16) Nucleotides (101) Proteins (50) Interactants (30) Wiki
XB-GENEPAGE-975976

Show:     All X. tropicalis X. laevis

Nucleotide sequences for atp1b4 - All

RefSeq mRNAs(4)
Models - Gene (29)
Models - mRNA (34)
mRNAs (7)
ESTs (19)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_002931802 XM_002931802.5 protein ATP1B4 isoform X1 3643 bp XP_002931848 X. tropicalis
XM_004915750 XM_004915750.4 protein ATP1B4 isoform X1 3425 bp XP_004915807 X. tropicalis
XM_004915751 XM_004915751.4 protein ATP1B4 isoform X2 3376 bp XP_004915808 X. tropicalis
NM_001096501 NM_001096501.1 protein ATP1B4 1572 bp NP_001089970 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g35019 X. laevis.L
NCBI 10.0 XBXT10g018543 X. tropicalis
ENSEMBL 10.0 atp1b4 X. tropicalis
Xenbase 9.2 gene1928 X. laevis.L
JGI 9.1 Xelaev18038714m.g X. laevis.L
Xenbase 9.1 gene1662 X. tropicalis
ENSEMBL 9.1 atp1b4 X. tropicalis
JGI 8.0 Xetrov14033114m.g X. tropicalis
JGI 7.2 Xelaev16072226m.g X. laevis.L
JGI 7.1 Xetro.G00124 X. tropicalis
JGI 6.0 XeXenL6RMv10005813m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000004477 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100208 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_100039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_100121 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_10000121 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_10000039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100236 X. tropicalis
JGI 4.1 e_gw1.10.208.1 X. tropicalis
JGI 4.1 e_gw1.10.236.1 X. tropicalis
JGI 4.1 e_gw1.10.24.1 X. tropicalis
JGI 4.1 e_gw1.10.25.1 X. tropicalis
JGI 4.1 gw1.10.208.1 X. tropicalis
JGI 4.1 gw1.10.236.1 X. tropicalis
JGI 4.1 gw1.10.24.1 X. tropicalis
JGI 4.1 gw1.10.25.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_100061 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100025 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA66143 X. laevis.L
ENSEMBL 10.0 ENSXETT00000091432 X. tropicalis
ENSEMBL 10.0 ENSXETT00000117600 X. tropicalis
NCBI 10.0 mRNA091536 X. tropicalis
ENSEMBL 10.0 ENSXETT00000009712 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096851 X. tropicalis
Xenbase 9.2 rna5616 X. laevis.L
Xenbase 9.1 rna5447 X. tropicalis
ENSEMBL 9.1 ENSXETT00000009712 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091432 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096851 X. tropicalis
JGI 9.1 Xelaev18038714m X. laevis.L
JGI 8.0 Xetrov14033114m X. tropicalis
JGI 7.2 Xelaev16072226m X. laevis.L
JGI 7.1 Xetro.G00124.1 X. tropicalis
JGI 6.0 XeXenL6RMv10005813m X. laevis.L
JGI 4.1 gw1.10.24.1 X. tropicalis
JGI 4.1 gw1.10.25.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100208 X. tropicalis
JGI 4.1 e_gw1.10.236.1 X. tropicalis
JGI 4.1 e_gw1.10.24.1 X. tropicalis
JGI 4.1 e_gw1.10.25.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009712 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_100121 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_100039 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_100061 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100025 X. tropicalis
JGI 4.1 e_gw1.10.208.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100236 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_10000121 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_10000039 X. tropicalis
JGI 4.1 gw1.10.208.1 X. tropicalis
JGI 4.1 gw1.10.236.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
XM_002931802 X. tropicalis
XM_004915750 X. tropicalis
XM_004915751 X. tropicalis
IMAGE:9041652 BC170017 X. laevis.L
IMAGE:9041654 BC170019 X. laevis.L
DQ413025 X. laevis.L
NM_001096501 X. laevis.L

ESTs (19)

Clone Accession 5'/3' Species Library Anatomy Stage
st83e22 DC187296 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8934861 EL636067 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
TTbA010d23 CR413186 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8936500 EL638568 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:9015297 EL861886 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7027255 CF784498 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7788007 CX332923 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu140k11 AL803703 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7610571 CX377088 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8934861 EL636066 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7027255 CF784497 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7788007 CX332922 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610571 CX377087 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8936500 EL638567 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:9015297 EL861887 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XL102j05 BJ067719 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL095c22 BJ071693 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL102j05 BJ085057 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL095c22 BJ088808 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25