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Summary Expression Phenotypes Gene Literature (0) GO Terms (17) Nucleotides (171) Proteins (70) Interactants (7) Wiki
XB-GENEPAGE-974821

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ddx49 - Xenopus tropicalis

RefSeq mRNAs(3)
Models - Gene (24)
Models - mRNA (34)
mRNAs (4)
ESTs (43)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_204078 NM_204078.1 probable ATP-dependent RNA helicase DDX49 3219 bp NP_989409 X. tropicalis
XM_012958676 XM_012958676.3 probable ATP-dependent RNA helicase DDX49 isoform X1 3065 bp XP_012814130 X. tropicalis
XM_012958685 XM_012958685.1 probable ATP-dependent RNA helicase DDX49 isoform X2 3213 bp XP_012814139 X. tropicalis

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g011592 X. tropicalis
ENSEMBL 10.0 ddx49 X. tropicalis
Xenbase 9.1 gene6818 X. tropicalis
ENSEMBL 9.1 ddx49 X. tropicalis
JGI 8.0 Xetrov14003050m.g X. tropicalis
JGI 7.1 Xetro.A02012 X. tropicalis
ENSEMBL 4.1 ENSXETG00000010135 X. tropicalis
JGI 4.1 gw1.646.41.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6460039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6460040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6460041 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_6460003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6460008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6460004 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_646000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_646000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_646000008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6460007 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6460005 X. tropicalis
JGI 4.1 e_gw1.646.39.1 X. tropicalis
JGI 4.1 e_gw1.646.40.1 X. tropicalis
JGI 4.1 e_gw1.646.41.1 X. tropicalis
JGI 4.1 gw1.646.39.1 X. tropicalis
JGI 4.1 gw1.646.40.1 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000019606 X. tropicalis
ENSEMBL 10.0 ENSXETT00000084286 X. tropicalis
NCBI 10.0 mRNA057567 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067096 X. tropicalis
ENSEMBL 9.1 ENSXETT00000019606 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067096 X. tropicalis
Xenbase 9.1 rna22010 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084286 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087415 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092920 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103554 X. tropicalis
JGI 8.0 Xetrov14003050m X. tropicalis
JGI 7.1 Xetro.A02012.1 X. tropicalis
JGI 7.1 Xetro.A02012.2 X. tropicalis
JGI 7.1 Xetro.A02012.3 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_646000008 X. tropicalis
JGI 4.1 gw1.646.39.1 X. tropicalis
JGI 4.1 gw1.646.40.1 X. tropicalis
JGI 4.1 gw1.646.41.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6460004 X. tropicalis
JGI 4.1 e_gw1.646.40.1 X. tropicalis
JGI 4.1 e_gw1.646.41.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000019606 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022350 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_6460003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6460007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6460008 X. tropicalis
JGI 4.1 e_gw1.646.39.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6460005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6460039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6460040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6460041 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_646000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_646000007 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
IMAGE:5379502 BC064887 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
NM_204078 X. tropicalis
XM_012958676 X. tropicalis
XM_012958685 X. tropicalis

ESTs (43)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA078g23 CR433050 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu131g01 AL792715 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu096d08 AL786885 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5379502 BQ523307 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA076a13 CR444530 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA053l10 CR582752 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7788206 DR904909 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT1076 CX360057 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7640289 CX314985 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7559673 CX514511 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566450 CX506687 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545159 CX487316 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519909 CX479809 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567920 CX455766 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529416 CX426518 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530573 CX419794 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7653374 CX821748 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7672073 CX880185 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7664839 CX849353 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
CAAO7840 CX941740 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8883222 EL838949 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8882870 EL838299 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7029012 CF786345 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xthr29L03 CN106498 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA036g06 CR447595 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:5379502 BQ523306 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7664839 CX849352 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7545159 CX487315 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA036g06 CR447596 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7653374 CX821747 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7519909 CX479808 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu131g01 BX702036 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA053l10 CR582753 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8882870 EL838300 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7567920 CX455765 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7672073 CX880184 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
XZT1076 CX360056 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7788206 CX333743 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7529416 CX426517 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO7840 CX941739 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7559673 CX514510 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530573 CX419793 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566450 CX506686 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5