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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (167) Proteins (40) Interactants (15) Wiki
XB-GENEPAGE-972765

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for zcchc9 - All

RefSeq mRNAs(2)
Models - Gene (30)
Models - mRNA (31)
mRNAs (4)
ESTs (77)

RefSeq mRNAs (2)

Accession Version Protein Name Length Protein Species
NM_001011465 NM_001011465.1 zinc finger CCHC domain-containing protein 9 1253 bp NP_001011465 X. tropicalis
NM_001091096 NM_001091096.1 zinc finger CCHC-type containing 9 L homeolog 1304 bp NP_001084565 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g013952 X. tropicalis
NCBI 10.1 XBXL10_1g3047 X. laevis.L
ENSEMBL 10.0 zcchc9 X. tropicalis
JGI 9.1 Xelaev18008112m.g X. laevis.L
Xenbase 9.1 gene2931 X. tropicalis
Xenbase 9.2 gene2087 X. laevis.L
ENSEMBL 9.1 zcchc9 X. tropicalis
JGI 8.0 Xetrov14000829m.g X. tropicalis
JGI 7.1 Xetro.A01933 X. tropicalis
JGI 7.2 Xelaev16004943m.g X. laevis.L
JGI 6.0 XeXenL6RMv10050963m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000027804 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1650008 X. tropicalis
JGI 4.1 gw1.165.10.1 X. tropicalis
JGI 4.1 gw1.165.130.1 X. tropicalis
JGI 4.1 gw1.165.81.1 X. tropicalis
JGI 4.1 e_gw1.165.10.1 X. tropicalis
JGI 4.1 e_gw1.165.130.1 X. tropicalis
JGI 4.1 e_gw1.165.81.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1650015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1650010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1650081 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1650130 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1650018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1650019 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1650002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_165000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_165000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_165000019 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_165000002 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.0 mRNA069038 X. tropicalis
NCBI 10.1 XBmRNA5512 X. laevis.L
ENSEMBL 10.0 ENSXETT00000057849 X. tropicalis
JGI 9.1 Xelaev18008112m X. laevis.L
Xenbase 9.1 rna9605 X. tropicalis
Xenbase 9.2 rna6059 X. laevis.L
ENSEMBL 9.1 ENSXETT00000057849 X. tropicalis
JGI 8.0 Xetrov14000829m X. tropicalis
JGI 7.1 Xetro.A01933.1 X. tropicalis
JGI 7.1 Xetro.A01933.2 X. tropicalis
JGI 7.2 Xelaev16004943m X. laevis.L
JGI 6.0 XeXenL6RMv10050963m X. laevis.L
JGI 4.1 estExt_fgenesh1_kg.C_1650008 X. tropicalis
ENSEMBL 4.1 ENSXETT00000057849 X. tropicalis
JGI 4.1 e_gw1.165.10.1 X. tropicalis
JGI 4.1 e_gw1.165.130.1 X. tropicalis
JGI 4.1 e_gw1.165.81.1 X. tropicalis
JGI 4.1 gw1.165.10.1 X. tropicalis
JGI 4.1 gw1.165.130.1 X. tropicalis
JGI 4.1 gw1.165.81.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1650015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1650010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1650081 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1650130 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1650018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1650019 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1650002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_165000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_165000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_165000019 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_165000002 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
NM_001011465 X. tropicalis
IMAGE:6991574 BC088591 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6635495 BC068817 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001091096 X. laevis.L

ESTs (77)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6991574 CF240527 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
st36b15 DC173611 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st83o22 DC187454 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8936923 EL639423 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8907863 EL801649 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8919380 EL833504 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9016544 EL863747 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7634045 CX375371 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st108l19 DC194091 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st110l19 DC194572 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st10g10 DC165715 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st11g10 DC166002 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7513283 CX742502 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7670687 CX878197 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7709735 CX964820 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7571929 CX513160 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7852638 DT392611 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
CAAO2382 CX932530 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO4602 CX935848 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA014i24 BX715220 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA036i15 CR580987 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA036k15 CR580992 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7529728 CX426644 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525892 CX443162 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6977599 CF224370 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6993172 CF238729 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:9016544 EL863748 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst83o22 DC157326 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst108l19 DC163440 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8936923 EL639422 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8907863 EL801650 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
rst10g10 DC135634 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst11g10 DC135933 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst113o08 DC165566 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst36b15 DC143361 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7709735 CX964819 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
CAAO2382 CX932529 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO4602 CX935847 3' X. tropicalis NIH_XGC_tropTe5 testis frog
TNeu057i21 BX683981 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA014i24 BX715221 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7634045 CX375370 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7571929 CX513159 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7513283 CX742501 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:6977599 CF224371 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
xlk156l05ex DC063040 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl239j16 DC105596 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl239j21 DC105600 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl286c09 DC119195 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8538626 EB461721 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:8540217 EB462289 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:8643709 EB735444 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
xlk129c08ex DC044976 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk165h03ex DC065849 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk74p02ex DC059316 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL418h21ex BP675026 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL443a10ex BP683454 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL457e22ex BP688406 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL466f02ex BP691754 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:4678745 BI349696 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4682713 BQ735474 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6635495 BU909794 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6323722 CA972101 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6870157 CA982980 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL162i22 BJ613188 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk74p02ex DC025877 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl286c09 DC084464 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl239j16 DC071315 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl239j21 DC071318 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk156l05ex DC029542 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk129c08ex DC011818 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk165h03ex DC032298 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL418h21ex BP712539 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL443a10ex BP719545 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL457e22ex BP723632 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL466f02ex BP726163 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL162i22 BJ629730 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL197h03 BJ638167 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5