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Summary Expression Phenotypes Gene Literature (0) GO Terms (5) Nucleotides (130) Proteins (81) Interactants (55) Wiki
XB-GENEPAGE-968730

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for rnf31 - Xenopus tropicalis

RefSeq mRNAs(5)
Models - Gene (20)
Models - mRNA (33)
mRNAs (7)
ESTs (13)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001097175 NM_001097175.1 E3 ubiquitin-protein ligase RNF31 3171 bp NP_001090644 X. tropicalis
XM_031899674 XM_031899674.1 XP_031755534.1 E3 ubiquitin-protein ligase RNF31 isoform X1 3836 bp XP_031755534 X. tropicalis
XM_031899717 XM_031899717.1 XP_031755577.1 E3 ubiquitin-protein ligase RNF31 isoform X1 3809 bp XP_031755577 X. tropicalis
XM_031899951 XM_031899951.1 XP_031755811.1 E3 ubiquitin-protein ligase RNF31 isoform X2 3833 bp XP_031755811 X. tropicalis
XM_012962713 XM_012962713.3 E3 ubiquitin-protein ligase RNF31 isoform X3 3674 bp XP_012818167 X. tropicalis

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g007845 X. tropicalis
ENSEMBL 10.0 rnf31 X. tropicalis
Xenbase 9.1 gene23705 X. tropicalis
ENSEMBL 9.1 rnf31 X. tropicalis
JGI 8.0 Xetrov14002402m.g X. tropicalis
JGI 7.1 Xetro.A01558 X. tropicalis
ENSEMBL 4.1 ENSXETG00000014618 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4390079 X. tropicalis
JGI 4.1 e_gw1.439.14.1 X. tropicalis
JGI 4.1 e_gw1.439.2.1 X. tropicalis
JGI 4.1 e_gw1.439.82.1 X. tropicalis
JGI 4.1 gw1.439.2.1 X. tropicalis
JGI 4.1 gw1.439.82.1 X. tropicalis
JGI 4.1 gw1.439.14.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4390018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4390002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4390014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4390029 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_439000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_439000029 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA038866 X. tropicalis
ENSEMBL 10.0 ENSXETT00000078401 X. tropicalis
ENSEMBL 10.0 ENSXETT00000031992 X. tropicalis
ENSEMBL 10.0 ENSXETT00000052657 X. tropicalis
Xenbase 9.1 rna47423 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061546 X. tropicalis
ENSEMBL 9.1 ENSXETT00000031992 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078401 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075803 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080053 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103574 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081436 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067921 X. tropicalis
ENSEMBL 9.1 ENSXETT00000052657 X. tropicalis
JGI 8.0 Xetrov14002402m X. tropicalis
JGI 7.1 Xetro.A01558.4 X. tropicalis
JGI 7.1 Xetro.A01558.2 X. tropicalis
JGI 7.1 Xetro.A01558.1 X. tropicalis
JGI 7.1 Xetro.A01558.3 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4390079 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031992 X. tropicalis
JGI 4.1 e_gw1.439.14.1 X. tropicalis
JGI 4.1 e_gw1.439.2.1 X. tropicalis
JGI 4.1 e_gw1.439.82.1 X. tropicalis
JGI 4.1 gw1.439.2.1 X. tropicalis
JGI 4.1 gw1.439.82.1 X. tropicalis
JGI 4.1 gw1.439.14.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4390018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4390002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4390014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4390029 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_439000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_439000029 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7675167 BC127272 X. tropicalis
TEgg127o10 CR942479 X. tropicalis
NM_001097175 X. tropicalis
XM_012962713 X. tropicalis
XM_031899951 X. tropicalis
XM_031899717 X. tropicalis
XM_031899674 X. tropicalis

ESTs (13)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8853470 EL815161 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8959724 EL654043 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
st17m15 DC167925 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7607320 CX368166 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7709536 CX965109 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7686575 CX907615 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas047f05 AL651021 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8853470 EL815162 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
rst17m15 DC137835 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst17l15 DC137817 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7686575 CX907614 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7607320 DR894475 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7709536 CX965108 3' X. tropicalis NIH_XGC_tropInt1 intestine frog