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Summary Expression Phenotypes Gene Literature (0) GO Terms (4) Nucleotides (111) Proteins (52) Interactants (21) Wiki
XB-GENEPAGE-968688

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for lrrc40 - All

RefSeq mRNAs(2)
Models - Gene (30)
Models - mRNA (38)
mRNAs (6)
ESTs (18)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001011310 NM_001011310.1 leucine-rich repeat-containing protein 40 2013 bp NP_001011310 X. tropicalis
NM_001092203 NM_001092203.1 leucine-rich repeat-containing protein 40 2319 bp NP_001085672 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g018423 X. tropicalis
NCBI 10.1 XBXL10_1g19041 X. laevis.L
ENSEMBL 10.0 lrrc40 X. tropicalis
JGI 9.1 Xelaev18022954m.g X. laevis.L
Xenbase 9.1 gene3965 X. tropicalis
Xenbase 9.2 gene19207 X. laevis.L
ENSEMBL 9.1 lrrc40 X. tropicalis
JGI 8.0 Xetrov14019042m.g X. tropicalis
JGI 7.1 Xetro.D01781 X. tropicalis
JGI 7.2 Xelaev16029059m.g X. laevis.L
JGI 6.0 XeXenL6RMv10025122m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000012372 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4310029 X. tropicalis
JGI 4.1 e_gw1.431.29.1 X. tropicalis
JGI 4.1 e_gw1.431.44.1 X. tropicalis
JGI 4.1 e_gw1.431.63.1 X. tropicalis
JGI 4.1 gw1.431.29.1 X. tropicalis
JGI 4.1 gw1.431.44.1 X. tropicalis
JGI 4.1 gw1.431.63.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4310002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4310044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4310063 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4310001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4310002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4310003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4310002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_431000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_431000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_431000003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_431000002 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.0 mRNA090934 X. tropicalis
NCBI 10.1 XBmRNA35130 X. laevis.L
ENSEMBL 10.0 ENSXETT00000104419 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089996 X. tropicalis
ENSEMBL 10.0 ENSXETT00000027052 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090452 X. tropicalis
JGI 9.1 Xelaev18022954m X. laevis.L
Xenbase 9.1 rna12957 X. tropicalis
Xenbase 9.2 rna56105 X. laevis.L
ENSEMBL 9.1 ENSXETT00000027052 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090452 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089996 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084726 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087648 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104419 X. tropicalis
JGI 8.0 Xetrov14019042m X. tropicalis
JGI 7.1 Xetro.D01781.1 X. tropicalis
JGI 7.2 Xelaev16029059m X. laevis.L
JGI 6.0 XeXenL6RMv10025122m X. laevis.L
JGI 4.1 estExt_Genewise1.C_4310029 X. tropicalis
ENSEMBL 4.1 ENSXETT00000027052 X. tropicalis
JGI 4.1 e_gw1.431.29.1 X. tropicalis
JGI 4.1 e_gw1.431.44.1 X. tropicalis
JGI 4.1 e_gw1.431.63.1 X. tropicalis
JGI 4.1 gw1.431.29.1 X. tropicalis
JGI 4.1 gw1.431.44.1 X. tropicalis
JGI 4.1 gw1.431.63.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4310002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4310044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4310063 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4310001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4310002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4310003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4310002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_431000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_431000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_431000003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_431000002 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
NM_001011310 X. tropicalis
IMAGE:7021454 BC088034 X. tropicalis
XM_031900054 X. tropicalis
XM_031900053 X. tropicalis
IMAGE:5079485 BC073124 X. laevis.L
NM_001092203 X. laevis.L

ESTs (18)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8913823 EL825567 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8906506 EL799179 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
XZT3682 CX399202 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7624397 CX401367 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7604865 CX411570 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7784735 DR904076 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7587224 CX313337 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr02C06 CN119684 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr02C06 CN106869 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas048b07 AL651084 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA004b20 BX705857 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8913823 EL825568 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8906506 EL799180 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
XZT3682 CX399201 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7604865 CX411569 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7624397 CX401366 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr02C06 CN106868 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA004b20 BX705858 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40