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Summary Expression Phenotypes Gene Literature (0) GO Terms (15) Nucleotides (133) Proteins (64) Interactants (7) Wiki
XB-GENEPAGE-968173

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for atp2c1 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (18)
Models - mRNA (36)
mRNAs (2)
ESTs (18)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
XM_002937743 XM_002937743.5 calcium-transporting ATPase type 2C member 1 isoform X1 3812 bp XP_002937789 X. tropicalis
XM_018094993 XM_018094993.1 calcium-transporting ATPase type 2C member 1 isoform X2 3641 bp XP_017950482 X. tropicalis

Models - Gene (18)

Source Version Model Species
NCBI 10.0 XBXT10g012214 X. tropicalis
ENSEMBL 10.0 atp2c1 X. tropicalis
Xenbase 9.1 gene32715 X. tropicalis
ENSEMBL 9.1 atp2c1 X. tropicalis
JGI 7.1 Xetro.F01210 X. tropicalis
ENSEMBL 4.1 ENSXETG00000002329 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3140090 X. tropicalis
JGI 4.1 e_gw1.314.35.1 X. tropicalis
JGI 4.1 e_gw1.314.89.1 X. tropicalis
JGI 4.1 e_gw1.314.90.1 X. tropicalis
JGI 4.1 gw1.314.35.1 X. tropicalis
JGI 4.1 gw1.314.89.1 X. tropicalis
JGI 4.1 gw1.314.90.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3140005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3140035 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3140064 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3140089 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3140003 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.0 mRNA060504 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069888 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085031 X. tropicalis
ENSEMBL 10.0 ENSXETT00000077012 X. tropicalis
ENSEMBL 10.0 ENSXETT00000004976 X. tropicalis
Xenbase 9.1 rna61830 X. tropicalis
ENSEMBL 9.1 ENSXETT00000004976 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070881 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085031 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071715 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077012 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089250 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082765 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067258 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093897 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069888 X. tropicalis
JGI 7.1 Xetro.F01210.1 X. tropicalis
JGI 7.1 Xetro.F01210.2 X. tropicalis
JGI 7.1 Xetro.F01210.3 X. tropicalis
JGI 7.1 Xetro.F01210.4 X. tropicalis
JGI 7.1 Xetro.F01210.6 X. tropicalis
JGI 7.1 Xetro.F01210.5 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3140090 X. tropicalis
ENSEMBL 4.1 ENSXETT00000004972 X. tropicalis
ENSEMBL 4.1 ENSXETT00000004976 X. tropicalis
JGI 4.1 e_gw1.314.35.1 X. tropicalis
JGI 4.1 e_gw1.314.89.1 X. tropicalis
JGI 4.1 e_gw1.314.90.1 X. tropicalis
JGI 4.1 gw1.314.35.1 X. tropicalis
JGI 4.1 gw1.314.89.1 X. tropicalis
JGI 4.1 gw1.314.90.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3140005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3140035 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3140064 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3140089 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3140003 X. tropicalis

mRNAs from cDNA libraries (2)

Clone Accession Species Library Anatomy Stage
XM_002937743 X. tropicalis
XM_018094993 X. tropicalis

ESTs (18)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7585935 CX319051 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7612515 CX404851 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7545623 CX488203 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7718337 CX980502 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7699403 CX931939 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7693071 CX919835 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688578 CX911431 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7522667 CX471690 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7527009 CX443970 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu030l08 AL655605 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7016386 CF522805 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:5335990 BQ521451 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5382144 BQ393401 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7545623 CX488202 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7699403 CX931938 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7693071 CX919834 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688578 CX911430 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7527009 CX443969 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5