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XB-GENEPAGE-967110
Nucleotide sequences for atg4b - All
RefSeq mRNAs(9) |
Models - Gene (33) |
Models - mRNA (38) |
mRNAs (11) |
ESTs (28) |
RefSeq mRNAs (9)
Accession | Version | Protein Name | Length | Protein | Species |
NM_001078996 | NM_001078996.1 | cysteine protease ATG4B | 2043 bp | NP_001072464 | X. tropicalis |
XM_012970551 | XM_012970551.3 | cysteine protease ATG4B isoform X1 | 2085 bp | XP_012826005 | X. tropicalis |
XM_018093940 | XM_018093940.2 | cysteine protease ATG4B isoform X2 | 2093 bp | XP_017949429 | X. tropicalis |
XM_041564968 | XM_041564968.1 | XP_041420902.1 cysteine protease ATG4B-like isoform X2 | 2167 bp | XP_041420902 | X. laevis.S |
XM_018262027 | XM_018262027.2 | cysteine protease ATG4B isoform X1 | 2235 bp | XP_018117516 | X. laevis.L |
XM_018262028 | XM_018262028.2 | cysteine protease ATG4B isoform X2 | 2075 bp | XP_018117517 | X. laevis.L |
XM_018262029 | XM_018262029.2 | cysteine protease ATG4B isoform X3 | 2084 bp | XP_018117518 | X. laevis.L |
XM_018265830 | XM_018265830.2 | cysteine protease ATG4B-like isoform X1 | 2167 bp | XP_018121319 | X. laevis.S |
NM_001094556 | NM_001094556.1 | cysteine protease ATG4B | 2038 bp | NP_001088025 | X. laevis.L |
Models - Gene (33)
Source | Version | Model | Species |
NCBI | 10.0 | XBXT10g017760 | X. tropicalis |
NCBI | 10.1 | XBXL10_1g24177 | X. laevis.L |
NCBI | 10.1 | XBXL10_1g26007 | X. laevis.S |
ENSEMBL | 10.0 | atg4b | X. tropicalis |
JGI | 9.1 | Xelaev18027812m.g | X. laevis.L |
JGI | 9.1 | Xelaev18029880m.g | X. laevis.S |
Xenbase | 9.1 | gene6450 | X. tropicalis |
Xenbase | 9.2 | gene19126 | X. laevis.L |
Xenbase | 9.2 | gene43716 | X. laevis.S |
ENSEMBL | 9.1 | atg4b | X. tropicalis |
JGI | 8.0 | Xetrov14021622m.g | X. tropicalis |
JGI | 7.1 | Xetro.I00838 | X. tropicalis |
JGI | 7.2 | Xelaev16049025m.g | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10038641m.g | X. laevis.L |
ENSEMBL | 4.1 | ENSXETG00000002981 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_2240120 | X. tropicalis |
JGI | 4.1 | e_gw1.224.114.1 | X. tropicalis |
JGI | 4.1 | e_gw1.224.120.1 | X. tropicalis |
JGI | 4.1 | e_gw1.224.85.1 | X. tropicalis |
JGI | 4.1 | gw1.224.114.1 | X. tropicalis |
JGI | 4.1 | gw1.224.120.1 | X. tropicalis |
JGI | 4.1 | gw1.224.85.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_2240031 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_2240085 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_2240114 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_kg.C_2240015 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_2240056 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_2240057 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pm.C_2240021 | X. tropicalis |
JGI | 4.1 | fgenesh1_kg.C_scaffold_224000015 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_224000057 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_224000058 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_224000022 | X. tropicalis |
mRNAs based on gene models(38)
Source | Version | Model | Species |
NCBI | 10.0 | mRNA087641 | X. tropicalis |
NCBI | 10.1 | XBmRNA45242 | X. laevis.L |
NCBI | 10.1 | XBmRNA48662 | X. laevis.S |
ENSEMBL | 10.0 | ENSXETT00000097444 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000006516 | X. tropicalis |
JGI | 9.1 | Xelaev18027812m | X. laevis.L |
JGI | 9.1 | Xelaev18029880m | X. laevis.S |
Xenbase | 9.1 | rna20812 | X. tropicalis |
Xenbase | 9.2 | rna55861 | X. laevis.L |
Xenbase | 9.2 | rna87238 | X. laevis.S |
ENSEMBL | 9.1 | ENSXETT00000097444 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000089750 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000087108 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000006516 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000100262 | X. tropicalis |
JGI | 8.0 | Xetrov14021622m | X. tropicalis |
JGI | 7.1 | Xetro.I00838.1 | X. tropicalis |
JGI | 7.2 | Xelaev16049025m | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10038641m | X. laevis.L |
JGI | 4.1 | estExt_Genewise1.C_2240120 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000006516 | X. tropicalis |
JGI | 4.1 | e_gw1.224.114.1 | X. tropicalis |
JGI | 4.1 | e_gw1.224.120.1 | X. tropicalis |
JGI | 4.1 | e_gw1.224.85.1 | X. tropicalis |
JGI | 4.1 | gw1.224.114.1 | X. tropicalis |
JGI | 4.1 | gw1.224.120.1 | X. tropicalis |
JGI | 4.1 | gw1.224.85.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_2240031 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_2240085 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_2240114 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_kg.C_2240015 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_2240056 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_2240057 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pm.C_2240021 | X. tropicalis |
JGI | 4.1 | fgenesh1_kg.C_scaffold_224000015 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_224000057 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_224000058 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_224000022 | X. tropicalis |
mRNAs from cDNA libraries (11)
Clone | Accession | Species | Library | Anatomy | Stage |
NM_001078996 | X. tropicalis | ||||
IMAGE:7669497 | BC121870 | X. tropicalis | NIH_XGC_tropBrn4 | brain | frog |
XM_018093940 | X. tropicalis | ||||
XM_012970551 | X. tropicalis | ||||
IMAGE:4959884 | BC082660 | X. laevis.L | NICHD_XGC_Emb4 | whole organism | NF stage 31 to NF stage 32 |
NM_001094556 | X. laevis.L | ||||
XM_018265830 | X. laevis.S | ||||
XM_018262029 | X. laevis.L | ||||
XM_018262028 | X. laevis.L | ||||
XM_018262027 | X. laevis.L | ||||
XM_041564968 | X. laevis.S |