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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (223) Proteins (55) Interactants (15) Wiki
XB-GENEPAGE-966596

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for rrp9 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (20)
Models - mRNA (30)
mRNAs (2)
ESTs (50)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
XM_002935630 XM_002935630.5 U3 small nucleolar RNA-interacting protein 2 isoform X1 1664 bp XP_002935676 X. tropicalis
XM_031901133 XM_031901133.1 XP_031756993.1 U3 small nucleolar RNA-interacting protein 2 isoform X2 1585 bp XP_031756993 X. tropicalis

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g012342 X. tropicalis
ENSEMBL 10.0 rrp9 X. tropicalis
Xenbase 9.1 gene20802 X. tropicalis
ENSEMBL 9.1 rrp9 X. tropicalis
JGI 8.0 Xetrov14020310m.g X. tropicalis
JGI 7.1 Xetro.D02177 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1590089 X. tropicalis
JGI 4.1 gw1.159.106.1 X. tropicalis
JGI 4.1 gw1.159.217.1 X. tropicalis
JGI 4.1 gw1.159.89.1 X. tropicalis
JGI 4.1 e_gw1.159.106.1 X. tropicalis
JGI 4.1 e_gw1.159.217.1 X. tropicalis
JGI 4.1 e_gw1.159.89.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1590027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1590106 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1590217 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1590010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1590036 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_159000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_159000038 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA061109 X. tropicalis
ENSEMBL 10.0 ENSXETT00000061583 X. tropicalis
ENSEMBL 10.0 ENSXETT00000073234 X. tropicalis
Xenbase 9.1 rna42838 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097647 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073234 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061583 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087127 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091153 X. tropicalis
JGI 8.0 Xetrov14020310m X. tropicalis
JGI 7.1 Xetro.D02177.2 X. tropicalis
JGI 7.1 Xetro.D02177.3 X. tropicalis
JGI 7.1 Xetro.D02177.4 X. tropicalis
JGI 7.1 Xetro.D02177.5 X. tropicalis
JGI 7.1 Xetro.D02177.1 X. tropicalis
JGI 7.1 Xetro.D02177.6 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1590089 X. tropicalis
JGI 4.1 e_gw1.159.106.1 X. tropicalis
JGI 4.1 e_gw1.159.217.1 X. tropicalis
JGI 4.1 e_gw1.159.89.1 X. tropicalis
JGI 4.1 gw1.159.106.1 X. tropicalis
JGI 4.1 gw1.159.217.1 X. tropicalis
JGI 4.1 gw1.159.89.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1590027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1590106 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1590217 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1590010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1590036 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_159000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_159000038 X. tropicalis

mRNAs from cDNA libraries (2)

Clone Accession Species Library Anatomy Stage
XM_002935630 X. tropicalis
XM_031901133 X. tropicalis

ESTs (50)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8886942 EL844206 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8856682 EL820110 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8953942 EL662271 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
xtbs23F02 CN084218 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs04P24 CN074346 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st116e10 DC193524 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st115e10 DC193303 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st114e10 DC193067 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st99h11 DC192598 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st98h11 DC192348 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st97h11 DC192090 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st100h11 DC190710 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7636386 CX406524 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7553820 CX492343 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544526 CX486339 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543375 CX458610 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537081 CX445897 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA011i14 CR562155 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA064h01 CR425608 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA018o24 CR417322 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr29A03 CN106136 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr28L08 CN106091 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7092723 CK655934 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTpA053a19 BX731174 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu082b16 AL804603 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu061h04 AL674092 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu038l19 AL657851 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu022h11 AL641781 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6992490 CF241924 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6991860 CF240099 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6995423 CF239490 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6989010 CF219826 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6991018 CF216857 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6991018 CF216856 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6979239 CF149989 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas140i17 AL971576 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5308180 BQ390154 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8886942 EL844207 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8856682 EL820111 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs04P24 CN074345 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst115e10 DC164598 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst114e10 DC164330 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst99h11 DC162629 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst98h11 DC162368 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst97h11 DC162113 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst100h11 DC160711 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7543375 CX458609 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7636386 CX406523 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas140i17 BX764569 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6992490 CF241925 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19