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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (96) Proteins (40) Interactants (21) Wiki
XB-GENEPAGE-965594

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for smg8 - All

RefSeq mRNAs(1)
Models - Gene (28)
Models - mRNA (28)
mRNAs (5)
ESTs (19)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001078823 nonsense-mediated mRNA decay factor SMG8 3073 bp NP_001072291 X. tropicalis

Models - Gene (28)

Source Version Model Species
NCBI 10.0 XBXT10g014082 X. tropicalis
NCBI 10.1 XBXL10_1g7469 X. laevis.L
NCBI 10.1 XBXL10_1g10253 X. laevis.S
ENSEMBL 10.0 smg8 X. tropicalis
JGI 9.1 Xelaev18012718m.g X. laevis.L
JGI 9.1 Xelaev18015339m.g X. laevis.S
Xenbase 9.1 gene1712 X. tropicalis
Xenbase 9.2 gene38895 X. laevis.L
Xenbase 9.2 gene3434 X. laevis.S
ENSEMBL 9.1 smg8 X. tropicalis
JGI 7.1 Xetro.B00512 X. tropicalis
JGI 6.0 XeXenL6RMv10020994m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000001117 X. tropicalis
JGI 4.1 estExt_Genewise1.C_920135 X. tropicalis
JGI 4.1 e_gw1.92.135.1 X. tropicalis
JGI 4.1 e_gw1.92.23.1 X. tropicalis
JGI 4.1 e_gw1.92.86.1 X. tropicalis
JGI 4.1 gw1.92.135.1 X. tropicalis
JGI 4.1 gw1.92.23.1 X. tropicalis
JGI 4.1 gw1.92.86.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_920036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_920023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_920086 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_920075 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_920076 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_920019 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000076 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000077 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.0 mRNA069733 X. tropicalis
NCBI 10.1 XBmRNA14076 X. laevis.L
NCBI 10.1 XBmRNA19182 X. laevis.S
ENSEMBL 10.0 ENSXETT00000002451 X. tropicalis
JGI 9.1 Xelaev18012718m X. laevis.L
JGI 9.1 Xelaev18015339m X. laevis.S
Xenbase 9.1 rna5608 X. tropicalis
Xenbase 9.2 rna80272 X. laevis.L
Xenbase 9.2 rna9991 X. laevis.S
ENSEMBL 9.1 ENSXETT00000002451 X. tropicalis
JGI 7.1 Xetro.B00512.1 X. tropicalis
JGI 6.0 XeXenL6RMv10020994m X. laevis.L
JGI 4.1 estExt_Genewise1.C_920135 X. tropicalis
ENSEMBL 4.1 ENSXETT00000002451 X. tropicalis
JGI 4.1 e_gw1.92.135.1 X. tropicalis
JGI 4.1 e_gw1.92.23.1 X. tropicalis
JGI 4.1 e_gw1.92.86.1 X. tropicalis
JGI 4.1 gw1.92.135.1 X. tropicalis
JGI 4.1 gw1.92.23.1 X. tropicalis
JGI 4.1 gw1.92.86.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_920036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_920023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_920086 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_920075 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_920076 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_920019 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000076 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000077 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
NM_001078823 X. tropicalis
IMAGE:7694507 BC121322 X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu109h19 CT025291 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_018249652 X. laevis.S
XM_018246894 X. laevis.L

ESTs (19)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7578463 CX416063 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7694507 CX922662 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686789 CX907786 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu109h19 AL794841 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu106n08 AL788726 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
rst91o02 DC159311 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7694507 CX922661 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686789 CX907785 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu106n08 BX690437 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XL506o09ex BP702997 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL427p08ex BP677815 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL170n16 BJ615169 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL022j17 BJ033709 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3744227 BF427217 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
XL506o09ex BP735905 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7295889 CO388744 3' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL170n16 BJ631830 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL022j17 BJ048962 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3744227 BG016689 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage