Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (96) Proteins (40) Interactants (21) Wiki
XB-GENEPAGE-965594

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for smg8 - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (21)
Models - mRNA (21)
mRNAs (3)
ESTs (9)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001078823 NM_001078823.1 nonsense-mediated mRNA decay factor SMG8 3073 bp NP_001072291 X. tropicalis

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g014082 X. tropicalis
ENSEMBL 10.0 smg8 X. tropicalis
Xenbase 9.1 gene1712 X. tropicalis
ENSEMBL 9.1 smg8 X. tropicalis
JGI 7.1 Xetro.B00512 X. tropicalis
ENSEMBL 4.1 ENSXETG00000001117 X. tropicalis
JGI 4.1 estExt_Genewise1.C_920135 X. tropicalis
JGI 4.1 e_gw1.92.135.1 X. tropicalis
JGI 4.1 e_gw1.92.23.1 X. tropicalis
JGI 4.1 e_gw1.92.86.1 X. tropicalis
JGI 4.1 gw1.92.135.1 X. tropicalis
JGI 4.1 gw1.92.23.1 X. tropicalis
JGI 4.1 gw1.92.86.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_920036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_920023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_920086 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_920075 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_920076 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_920019 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000076 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000077 X. tropicalis

mRNAs based on gene models(21)

Source Version Model Species
NCBI 10.0 mRNA069733 X. tropicalis
ENSEMBL 10.0 ENSXETT00000002451 X. tropicalis
Xenbase 9.1 rna5608 X. tropicalis
ENSEMBL 9.1 ENSXETT00000002451 X. tropicalis
JGI 7.1 Xetro.B00512.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_920135 X. tropicalis
ENSEMBL 4.1 ENSXETT00000002451 X. tropicalis
JGI 4.1 e_gw1.92.135.1 X. tropicalis
JGI 4.1 e_gw1.92.23.1 X. tropicalis
JGI 4.1 e_gw1.92.86.1 X. tropicalis
JGI 4.1 gw1.92.135.1 X. tropicalis
JGI 4.1 gw1.92.23.1 X. tropicalis
JGI 4.1 gw1.92.86.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_920036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_920023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_920086 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_920075 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_920076 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_920019 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000076 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000077 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
NM_001078823 X. tropicalis
IMAGE:7694507 BC121322 X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu109h19 CT025291 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21

ESTs (9)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7578463 CX416063 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7694507 CX922662 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686789 CX907786 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu109h19 AL794841 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu106n08 AL788726 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
rst91o02 DC159311 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7694507 CX922661 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686789 CX907785 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu106n08 BX690437 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21