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Summary Expression Phenotypes Gene Literature (2) GO Terms (8) Nucleotides (128) Proteins (42) Interactants (407) Wiki
XB-GENEPAGE-964860

Show:     All X. tropicalis X. laevis

Nucleotide sequences for tsfm - All

RefSeq mRNAs(4)
Models - Gene (28)
Models - mRNA (28)
mRNAs (5)
ESTs (44)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_002933690 XM_002933690.5 elongation factor Ts, mitochondrial 1151 bp XP_002933736 X. tropicalis
NM_001097689 NM_001097689.1 elongation factor Ts, mitochondrial 1652 bp NP_001091158 X. laevis.L
XM_018244651 XM_018244651.2 elongation factor Ts, mitochondrial isoform X1 1585 bp XP_018100140 X. laevis.L
XM_041584442 XM_041584442.1 XP_041440376.1 elongation factor Ts, mitochondrial-like 1113 bp XP_041440376 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g10785 X. laevis.S
NCBI 10.1 XBXL10_1g8168 X. laevis.L
NCBI 10.0 XBXT10g007442 X. tropicalis
ENSEMBL 10.0 tsfm X. tropicalis
Xenbase 9.2 gene45016 X. laevis.L
Xenbase 9.2 gene42800 X. laevis.S
JGI 9.1 Xelaev18015960m.g X. laevis.S
JGI 9.1 Xelaev18013471m.g X. laevis.L
Xenbase 9.1 gene33965 X. tropicalis
ENSEMBL 9.1 tsfm X. tropicalis
JGI 7.2 Xelaev16009690m.g X. laevis.L
JGI 7.1 Xetro.B01410 X. tropicalis
JGI 6.0 XeXenL6RMv10004449m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000009653 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_67000041 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_670029 X. tropicalis
JGI 4.1 e_gw1.67.184.1 X. tropicalis
JGI 4.1 e_gw1.67.295.1 X. tropicalis
JGI 4.1 e_gw1.67.74.1 X. tropicalis
JGI 4.1 gw1.67.184.1 X. tropicalis
JGI 4.1 gw1.67.295.1 X. tropicalis
JGI 4.1 gw1.67.74.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_670074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_670181 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_670011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_670041 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_67000011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_670292 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.1 XBmRNA15448 X. laevis.L
NCBI 10.1 XBmRNA20297 X. laevis.S
NCBI 10.0 mRNA036907 X. tropicalis
ENSEMBL 10.0 ENSXETT00000021253 X. tropicalis
Xenbase 9.2 rna85856 X. laevis.S
Xenbase 9.2 rna89193 X. laevis.L
JGI 9.1 Xelaev18015960m X. laevis.S
Xenbase 9.1 rna63949 X. tropicalis
JGI 9.1 Xelaev18013471m X. laevis.L
ENSEMBL 9.1 ENSXETT00000021253 X. tropicalis
JGI 7.2 Xelaev16009690m X. laevis.L
JGI 7.1 Xetro.B01410.1 X. tropicalis
JGI 6.0 XeXenL6RMv10004449m X. laevis.L
JGI 4.1 gw1.67.295.1 X. tropicalis
JGI 4.1 gw1.67.74.1 X. tropicalis
JGI 4.1 gw1.67.184.1 X. tropicalis
JGI 4.1 e_gw1.67.295.1 X. tropicalis
JGI 4.1 e_gw1.67.74.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021253 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_670011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_670041 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_670029 X. tropicalis
JGI 4.1 estExt_Genewise1.C_670074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_670181 X. tropicalis
JGI 4.1 estExt_Genewise1.C_670292 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_67000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_67000041 X. tropicalis
JGI 4.1 e_gw1.67.184.1 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
XM_002933690 X. tropicalis
IMAGE:8533841 BC129644 X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
NM_001097689 X. laevis.L
XM_018244651 X. laevis.L
XM_041584442 X. laevis.S

ESTs (44)

Clone Accession 5'/3' Species Library Anatomy Stage
xthr26L05 CN104849 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8888111 EL845885 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7785784 CX316944 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA010l06 BX707897 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA049n21 BX727829 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA074m14 BX736254 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA074l14 BX736998 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7785784 CX316943 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA048d08 CR584183 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr46K21 CN117237 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr15C17 CN098688 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr19G11 CN101301 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr20I07 CN102685 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr26L05 CN104848 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr33P23 CN109441 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8888111 EL845886 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TNeu076b20 BX685618 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XL065o15 BJ060484 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0059B04 AW637490 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL038o15 BJ039916 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL027o20 BJ041882 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7982319 DR725440 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xl221h11 DC100045 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl223g23 DC100635 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl273k05 DC115747 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL145e09 BJ094367 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XENOPUS_SOURCE_ID:xlnga003k19 AW200613 5' X. laevis.L normalized Xenopus laevis gastrula whole organism NF stage 10.5 to NF stage 11.5
XL459g05ex BP689413 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:4930517 BQ730744 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5570893 BQ736385 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8533841 EB466589 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL104a12 BJ057428 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL103a12 BJ057750 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3437641 BG730148 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
XL100b05 BJ067261 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL027o20 BJ051160 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL103a12 BJ075586 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL104a12 BJ075901 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL065o15 BJ078701 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL100b05 BJ084668 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL459g05ex BP724176 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl221h11 DC082165 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl273k05 DC080817 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL038o15 BJ053464 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15