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Summary Expression Phenotypes Gene Literature (0) GO Terms (7) Nucleotides (214) Proteins (56) Interactants (11) Wiki
XB-GENEPAGE-964579

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ubr7 - All

RefSeq mRNAs(4)
Models - Gene (33)
Models - mRNA (38)
mRNAs (11)
ESTs (105)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_002933207 XM_002933207.5 putative E3 ubiquitin-protein ligase UBR7 3393 bp XP_002933253 X. tropicalis
NM_001093620 NM_001093620.1 ubiquitin protein ligase E3 component n-recognin 7 L homeolog 2050 bp NP_001087089 X. laevis.L
XM_018229012 XM_018229012.2 ubiquitin protein ligase E3 component n-recognin 7 L homeolog isoform X1 3540 bp XP_018084501 X. laevis.L
XM_018232412 XM_018232412.2 putative E3 ubiquitin-protein ligase UBR7 3848 bp XP_018087901 X. laevis.S

Models - Gene (33)

Source Version Model Species
NCBI 10.1 XBXL10_1g37352 X. laevis.S
NCBI 10.1 XBXL10_1g35791 X. laevis.L
NCBI 10.0 XBXT10g015082 X. tropicalis
ENSEMBL 10.0 ubr7 X. tropicalis
Xenbase 9.2 gene2001 X. laevis.S
Xenbase 9.2 gene13160 X. laevis.L
JGI 9.1 Xelaev18041303m.g X. laevis.S
JGI 9.1 Xelaev18039558m.g X. laevis.L
Xenbase 9.1 gene4954 X. tropicalis
ENSEMBL 9.1 ubr7 X. tropicalis
JGI 8.0 Xetrov14034571m.g X. tropicalis
JGI 7.2 Xelaev16050551m.g X. laevis.L
JGI 7.1 Xetro.H01256 X. tropicalis
JGI 6.0 XeXenL6RMv10023123m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000010305 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490174 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_49000094 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_49000033 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_49000093 X. tropicalis
JGI 4.1 e_gw1.49.172.1 X. tropicalis
JGI 4.1 e_gw1.49.173.1 X. tropicalis
JGI 4.1 e_gw1.49.174.1 X. tropicalis
JGI 4.1 gw1.49.172.1 X. tropicalis
JGI 4.1 gw1.49.173.1 X. tropicalis
JGI 4.1 gw1.49.174.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_490046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490172 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490173 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_490023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_490092 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_490093 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_490032 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_49000023 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.1 XBmRNA70505 X. laevis.S
NCBI 10.1 XBmRNA67612 X. laevis.L
NCBI 10.0 mRNA074598 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092264 X. tropicalis
Xenbase 9.2 rna5816 X. laevis.S
Xenbase 9.2 rna38260 X. laevis.L
Xenbase 9.1 rna16115 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071498 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073891 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084771 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092264 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099422 X. tropicalis
ENSEMBL 9.1 ENSXETT00000022694 X. tropicalis
JGI 9.1 Xelaev18039558m X. laevis.L
JGI 9.1 Xelaev18041303m X. laevis.S
JGI 8.0 Xetrov14034571m X. tropicalis
JGI 7.2 Xelaev16050551m X. laevis.L
JGI 7.1 Xetro.H01256.1 X. tropicalis
JGI 6.0 XeXenL6RMv10023123m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_49000023 X. tropicalis
JGI 4.1 e_gw1.49.173.1 X. tropicalis
JGI 4.1 e_gw1.49.174.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022694 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_490023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_490092 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_490093 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_490032 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_490046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490172 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490173 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490174 X. tropicalis
JGI 4.1 e_gw1.49.172.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_49000093 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_49000094 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_49000033 X. tropicalis
JGI 4.1 gw1.49.172.1 X. tropicalis
JGI 4.1 gw1.49.173.1 X. tropicalis
JGI 4.1 gw1.49.174.1 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:7666515 BC166174 X. tropicalis NIH_XGC_tropBrn4 brain frog
XM_002933207 X. tropicalis
IMAGE:6862554 BC082418 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:7020030 BC094480 X. laevis.L
IMAGE:7765927 BC110704 X. laevis.L
NM_001093620 X. laevis.L
XM_018229012 X. laevis.L
IMAGE:5543251 BC045250 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4683928 BC072289 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:7976113 BC110720 X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XM_018232412 X. laevis.S

ESTs (105)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu072l08 BX683564 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7530304 CX419621 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575360 CX429994 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu053i10 AL674441 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7575942 CX431349 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524271 CX438287 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7527390 CX444588 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu051i23 AL679717 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7543648 CX459788 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu075b22 AL776314 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu072l08 AL781746 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu123n09 AL802144 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu102b20 AL803231 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9018884 EL867920 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8918418 EL832170 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8917513 EL830970 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7666515 CX852648 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8959978 EL663946 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7607627 CX368014 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT435 CX359075 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas049e18 AL649570 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas053c12 AL678014 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas057b23 AL682707 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8913779 EL825596 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8859006 EL823472 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:6990990 CF272147 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7596413 CX336547 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786861 CX328673 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7791361 CX324875 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA048j01 CR588744 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA041k05 CR583749 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA006g10 CR576177 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA006h10 CR562834 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA035c23 CR429872 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA018l14 CR416161 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7559064 CX514270 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519286 CX478877 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522725 CX471755 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563438 CX468085 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521725 CX470181 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7596413 DR891089 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu053i10 BX684456 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu102b20 BX694544 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu123n09 BX702437 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas057b23 BX746020 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas053c12 BX747913 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas116i01 BX762174 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7575942 CX431348 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543648 CX459787 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522725 CX471754 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559064 CX514269 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575360 DR889858 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA037f08 CR419517 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA006h10 CR562835 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA041k05 CR583750 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7786861 CX328672 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT435 CX359074 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7791361 DR906059 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7666515 CX852647 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8859006 EL823473 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8913779 EL825597 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8917513 EL830971 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
XL463n05ex BP691195 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL502l04ex BP701740 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
PBX0038C11 AW635788 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xl264e16 DC113038 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl238m23 DC105343 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:6631484 BU906484 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL057e08 BJ075357 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:7298558 CO384698 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:8320549 DY556193 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8319355 DY554322 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7974254 DR721098 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL171p19 BJ615421 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
PBX0095A03 AW640420 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL170n13 BJ615166 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL030m06 BJ034754 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL419g20ex BP675336 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL401c11ex BP675559 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL404j14ex BP685864 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL451k14ex BP686577 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL481l03ex BP697452 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk135a15ex DC046864 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk77e21ex DC060088 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:6862554 CA986306 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL147b16 BJ094915 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl265e16 DC113339 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL419g20ex BP712813 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL401c11ex BP713028 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL451k14ex BP722318 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL463n05ex BP725678 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL481l03ex BP730704 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL501l04ex BP734456 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxlk135a15ex DC013668 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk77e21ex DC026629 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk156c11ex DC029364 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL057e08 BJ092744 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl276f04 DC081535 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL147b16 BJ098544 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5