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Summary Expression Phenotypes Gene Literature (1) GO Terms (7) Nucleotides (157) Proteins (44) Interactants (71) Wiki
XB-GENEPAGE-964490

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hmces - All

RefSeq mRNAs(3)
Models - Gene (31)
Models - mRNA (31)
mRNAs (8)
ESTs (40)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_203818 NM_203818.1 abasic site processing protein HMCES 1635 bp NP_989149 X. tropicalis
XM_041589250 XM_041589250.1 XP_041445184.1 abasic site processing protein HMCES isoform X1 2031 bp XP_041445184 X. laevis.L
NM_001091676 NM_001091676.1 abasic site processing protein HMCES 1992 bp NP_001085145 X. laevis.L

Models - Gene (31)

Source Version Model Species
NCBI 10.0 XBXT10g014543 X. tropicalis
NCBI 10.1 XBXL10_1g19991 X. laevis.L
ENSEMBL 10.0 hmces X. tropicalis
JGI 9.1 Xelaev18024003m.g X. laevis.L
Xenbase 9.1 gene5166 X. tropicalis
Xenbase 9.2 gene47936 X. laevis.L
ENSEMBL 9.1 hmces X. tropicalis
JGI 8.0 Xetrov14020502m.g X. tropicalis
JGI 7.1 Xetro.D02252 X. tropicalis
JGI 7.2 Xelaev16010472m.g X. laevis.L
JGI 6.0 XeXenL6RMv10013189m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000024746 X. tropicalis
JGI 4.1 estExt_Genewise1.C_440295 X. tropicalis
JGI 4.1 e_gw1.44.294.1 X. tropicalis
JGI 4.1 e_gw1.44.295.1 X. tropicalis
JGI 4.1 e_gw1.44.356.1 X. tropicalis
JGI 4.1 gw1.44.294.1 X. tropicalis
JGI 4.1 gw1.44.295.1 X. tropicalis
JGI 4.1 gw1.44.356.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_440046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_440294 X. tropicalis
JGI 4.1 estExt_Genewise1.C_440356 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_440014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_440067 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_440068 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_440025 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_44000011 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_44000014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_44000067 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_44000068 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_44000025 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.0 mRNA071913 X. tropicalis
NCBI 10.1 XBmRNA36990 X. laevis.L
ENSEMBL 10.0 ENSXETT00000035272 X. tropicalis
JGI 9.1 Xelaev18024003m X. laevis.L
Xenbase 9.1 rna16812 X. tropicalis
Xenbase 9.2 rna93284 X. laevis.L
ENSEMBL 9.1 ENSXETT00000035272 X. tropicalis
JGI 8.0 Xetrov14020502m X. tropicalis
JGI 7.1 Xetro.D02252.1 X. tropicalis
JGI 7.2 Xelaev16010472m X. laevis.L
JGI 6.0 XeXenL6RMv10013189m X. laevis.L
JGI 4.1 estExt_Genewise1.C_440295 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035272 X. tropicalis
JGI 4.1 e_gw1.44.294.1 X. tropicalis
JGI 4.1 e_gw1.44.295.1 X. tropicalis
JGI 4.1 e_gw1.44.356.1 X. tropicalis
JGI 4.1 gw1.44.294.1 X. tropicalis
JGI 4.1 gw1.44.295.1 X. tropicalis
JGI 4.1 gw1.44.356.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_440046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_440294 X. tropicalis
JGI 4.1 estExt_Genewise1.C_440356 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_440014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_440067 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_440068 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_440025 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_44000011 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_44000014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_44000067 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_44000068 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_44000025 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
NM_203818 X. tropicalis
TGas027m07 CR761600 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5379262 BC061596 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
XM_012960759 X. tropicalis
IMAGE:3405005 BC072347 X. laevis.L
NM_001091676 X. laevis.L
XM_018256661 X. laevis.L
XM_041589250 X. laevis.L

ESTs (40)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8857278 EL820512 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs22K19 CN083075 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
CAAO9226 CX957413 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO8045 CX942116 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO5755 CX937945 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7617659 CX361968 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7794988 CX964155 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7790901 DR905792 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7753615 DN054836 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7523342 CX473349 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525334 CX442680 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas027m07 AL655297 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas049j22 AL653184 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5379262 BQ522662 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8857278 EL820513 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs22K19 CN083074 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
CAAO9226 CX957412 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO8045 CX942115 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7794988 CX964154 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7617659 DR897319 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7753615 DN054835 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7523342 CX473348 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5379262 BQ522661 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:4462488 BG885539 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
xl223h17 DC100651 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGp998L089024 BX849173 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XL152j13 BJ096080 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL052l11 BJ069374 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086g13 BJ066522 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL076o23 BJ063652 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6866388 CA794087 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3745687 BE680473 5' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0090B09 AW640041 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl223h17 DC066723 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL193f07 BJ637141 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL184a06 BJ634737 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL152j13 BJ100406 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL052l11 BJ086319 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086g13 BJ083848 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3745687 BE678063 3' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)