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Summary Expression Phenotypes Gene Literature (0) GO Terms (12) Nucleotides (118) Proteins (47) Interactants (43) Wiki
XB-GENEPAGE-962948

Show:     All X. tropicalis X. laevis

Nucleotide sequences for chordc1 - All

RefSeq mRNAs(4)
Models - Gene (27)
Models - mRNA (35)
mRNAs (7)
ESTs (29)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001006700 NM_001006700.1 cysteine and histidine-rich domain-containing protein 1 1589 bp NP_001006701 X. tropicalis
XM_031895852 XM_031895852.1 XP_031751712.1 cysteine and histidine-rich domain-containing protein 1 isoform X1 1715 bp XP_031751712 X. tropicalis
XM_031895853 XM_031895853.1 XP_031751713.1 cysteine and histidine-rich domain-containing protein 1 isoform X1 1685 bp XP_031751713 X. tropicalis
NM_001091121 NM_001091121.1 cysteine and histidine-rich domain-containing protein 1 1677 bp NP_001084590 X. laevis.S

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g11107 X. laevis.S
NCBI 10.0 XBXT10g018271 X. tropicalis
ENSEMBL 10.0 chordc1 X. tropicalis
Xenbase 9.2 gene48611 X. laevis.S
JGI 9.1 Xelaev18016337m.g X. laevis.S
Xenbase 9.1 gene4189 X. tropicalis
ENSEMBL 9.1 chordc1 X. tropicalis
JGI 8.0 Xetrov14010984m.g X. tropicalis
JGI 7.2 Xelaev16044128m.g X. laevis.S
JGI 7.1 Xetro.B02177 X. tropicalis
JGI 6.0 XeXenL6RMv10010886m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000011727 X. tropicalis
JGI 4.1 fgenesh_pm_kg.C_scaffold_219000014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_219000045 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_219000020 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2190020 X. tropicalis
JGI 4.1 e_gw1.219.104.1 X. tropicalis
JGI 4.1 e_gw1.219.156.1 X. tropicalis
JGI 4.1 e_gw1.219.8.1 X. tropicalis
JGI 4.1 gw1.219.104.1 X. tropicalis
JGI 4.1 gw1.219.156.1 X. tropicalis
JGI 4.1 gw1.219.8.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2190034 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2190008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2190104 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2190156 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2190045 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA20873 X. laevis.S
NCBI 10.0 mRNA090222 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102333 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069907 X. tropicalis
ENSEMBL 10.0 ENSXETT00000025650 X. tropicalis
Xenbase 9.2 rna94244 X. laevis.S
ENSEMBL 9.1 ENSXETT00000093969 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102333 X. tropicalis
ENSEMBL 9.1 ENSXETT00000025650 X. tropicalis
ENSEMBL 9.1 ENSXETT00000063202 X. tropicalis
Xenbase 9.1 rna13690 X. tropicalis
JGI 9.1 Xelaev18016337m X. laevis.S
ENSEMBL 9.1 ENSXETT00000068574 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069907 X. tropicalis
JGI 8.0 Xetrov14010984m X. tropicalis
JGI 7.2 Xelaev16044128m X. laevis.S
JGI 7.1 Xetro.B02177.1 X. tropicalis
JGI 7.1 Xetro.B02177.2 X. tropicalis
JGI 6.0 XeXenL6RMv10010886m X. laevis.S
JGI 4.1 estExt_Genewise1.C_2190104 X. tropicalis
JGI 4.1 e_gw1.219.156.1 X. tropicalis
JGI 4.1 e_gw1.219.8.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025650 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2190045 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2190020 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2190034 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2190008 X. tropicalis
JGI 4.1 e_gw1.219.104.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2190156 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_219000045 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_219000020 X. tropicalis
JGI 4.1 fgenesh_pm_kg.C_scaffold_219000014 X. tropicalis
JGI 4.1 gw1.219.104.1 X. tropicalis
JGI 4.1 gw1.219.156.1 X. tropicalis
JGI 4.1 gw1.219.8.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7016116 BC075408 X. tropicalis NICHD_XGC_Swb1 whole organism frog
TEgg019p22 CR760980 X. tropicalis
NM_001006700 X. tropicalis
XM_031895852 X. tropicalis
XM_031895853 X. tropicalis
IMAGE:6317333 BC068697 X. laevis.S
NM_001091121 X. laevis.S

ESTs (29)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6978483 CF148459 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas042c02 AL653524 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas055l13 AL676376 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144m18 AL968757 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO3032 CX933703 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7524308 CX438865 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543503 CX458828 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7536469 CX477653 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7016116 CF523062 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7667384 CX854308 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7667384 CX854307 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7543503 CX458827 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO3032 CX933702 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7524308 CX438864 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7536469 CX477652 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas055l13 BX747134 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas124h17 BX760637 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144m18 BX761737 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
PBX0032A03 AW635307 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3377319 BE189756 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XL199f21 BJ621988 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL066b05 BJ060533 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL099m01 BJ072744 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL092m05 BJ074232 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL092m05 BJ088367 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL099m01 BJ089702 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL199f21 BJ638670 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3377319 BE188786 3' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XL066b05 BJ078748 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25