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Summary Expression Phenotypes Gene Literature (1) GO Terms (24) Nucleotides (186) Proteins (66) Interactants (102) Wiki
XB-GENEPAGE-962758

Show:     All X. tropicalis X. laevis

Nucleotide sequences for usp3 - All

RefSeq mRNAs(7)
Models - Gene (35)
Models - mRNA (44)
mRNAs (10)
ESTs (63)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001006782 NM_001006782.1 ubiquitin carboxyl-terminal hydrolase 3 1797 bp NP_001006783 X. tropicalis
XM_012966409 XM_012966409.3 ubiquitin carboxyl-terminal hydrolase 3 isoform X1 3518 bp XP_012821863 X. tropicalis
XM_012966410 XM_012966410.3 ubiquitin carboxyl-terminal hydrolase 3 isoform X2 3488 bp XP_012821864 X. tropicalis
NM_001097080 NM_001097080.1 ubiquitin thiolesterase 3 2334 bp NP_001090549 X. laevis.L
XM_018255616 XM_018255616.2 ubiquitin carboxyl-terminal hydrolase 3 isoform X1 3431 bp XP_018111105 X. laevis.S
XM_018255617 XM_018255617.2 ubiquitin carboxyl-terminal hydrolase 3 isoform X2 3496 bp XP_018111106 X. laevis.S
XM_018255618 XM_018255618.2 ubiquitin carboxyl-terminal hydrolase 3 isoform X2 3462 bp XP_018111107 X. laevis.S

Models - Gene (35)

Source Version Model Species
NCBI 10.1 XBXL10_1g15937 X. laevis.S
NCBI 10.1 XBXL10_1g12982 X. laevis.L
NCBI 10.0 XBXT10g013966 X. tropicalis
ENSEMBL 10.0 usp3 X. tropicalis
Xenbase 9.2 gene2450 X. laevis.L
Xenbase 9.2 gene8113 X. laevis.S
JGI 9.1 Xelaev18018003m.g X. laevis.L
JGI 9.1 Xelaev18020806m.g X. laevis.S
Xenbase 9.1 gene5178 X. tropicalis
ENSEMBL 9.1 usp3 X. tropicalis
JGI 8.0 Xetrov14013064m.g X. tropicalis
JGI 7.2 Xelaev16007085m.g X. laevis.L
JGI 7.1 Xetro.G00957 X. tropicalis
JGI 6.0 XeXenL6RMv10025742m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000009728 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_103000006 X. tropicalis
JGI 4.1 fgenesh_pm_kg.C_scaffold_103000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_103000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_103000042 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_103000011 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_103000014 X. tropicalis
JGI 4.1 e_gw1.103.145.1 X. tropicalis
JGI 4.1 e_gw1.103.216.1 X. tropicalis
JGI 4.1 e_gw1.103.64.1 X. tropicalis
JGI 4.1 gw1.103.216.1 X. tropicalis
JGI 4.1 gw1.103.145.1 X. tropicalis
JGI 4.1 gw1.103.64.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1030026 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030143 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030214 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1030014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1030041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1030042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1030011 X. tropicalis

mRNAs based on gene models(44)

Source Version Model Species
NCBI 10.1 XBmRNA29783 X. laevis.S
NCBI 10.1 XBmRNA24573 X. laevis.L
ENSEMBL 10.0 ENSXETT00000073935 X. tropicalis
NCBI 10.0 mRNA069090 X. tropicalis
Xenbase 9.2 rna23641 X. laevis.S
Xenbase 9.2 rna7132 X. laevis.L
ENSEMBL 9.1 ENSXETT00000084752 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088290 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098615 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102041 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104071 X. tropicalis
JGI 9.1 Xelaev18018003m X. laevis.L
Xenbase 9.1 rna16841 X. tropicalis
JGI 9.1 Xelaev18020806m X. laevis.S
ENSEMBL 9.1 ENSXETT00000021444 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071065 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073935 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076181 X. tropicalis
JGI 8.0 Xetrov14013064m X. tropicalis
JGI 7.2 Xelaev16007085m X. laevis.L
JGI 7.1 Xetro.G00957.2 X. tropicalis
JGI 7.1 Xetro.G00957.1 X. tropicalis
JGI 6.0 XeXenL6RMv10025742m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_103000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_103000042 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_103000011 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_103000006 X. tropicalis
JGI 4.1 fgenesh_pm_kg.C_scaffold_103000010 X. tropicalis
JGI 4.1 gw1.103.145.1 X. tropicalis
JGI 4.1 gw1.103.216.1 X. tropicalis
JGI 4.1 gw1.103.64.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030063 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1030026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1030011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1030042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1030041 X. tropicalis
JGI 4.1 e_gw1.103.145.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1030014 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021444 X. tropicalis
JGI 4.1 e_gw1.103.64.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030143 X. tropicalis
JGI 4.1 e_gw1.103.216.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030214 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_103000014 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:6994758 BC075590 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas017f06 CR762205 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001006782 X. tropicalis
XM_012966409 X. tropicalis
XM_012966410 X. tropicalis
IMAGE:8328948 BC126023 X. laevis.L
NM_001097080 X. laevis.L
XM_018255616 X. laevis.S
XM_018255617 X. laevis.S
XM_018255618 X. laevis.S

ESTs (63)

Clone Accession 5'/3' Species Library Anatomy Stage
XZT11233 CX311303 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA054g17 BX726012 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA075j21 CR430491 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7529368 CX426516 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577592 CX423773 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:9019176 EL868513 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9017519 EL865289 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st31d17 DC172318 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st32d17 DC172589 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xthr04B10 CN120486 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:5385035 BQ393050 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7518707 CX750601 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:6994758 CF239902 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8922552 EL837210 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8914133 EL826355 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8931347 EL665851 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
CAAO8583 CX956226 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7703323 CX939450 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas017f06 AL629547 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas047d23 AL651018 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas046a15 AL653322 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6988182 CF220537 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
CAAO2511 CX932761 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7668073 CX855443 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7604299 CX411053 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601471 CX364283 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601471 CX364282 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
rst31d17 DC142027 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst32d17 DC142310 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7518707 CX750600 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TGas136o12 BX763176 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7577592 CX423772 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA075j21 CR430492 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7604299 DR893582 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO2511 CX932760 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7703323 CX939449 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO8583 CX956225 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8931347 EL665850 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8914133 EL826356 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8922552 EL837211 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9017519 EL865290 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xl241i10 DC106190 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL090j07 BJ074538 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL014m23 BJ031846 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL220h10 BJ628097 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL202n20 BJ622949 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl316k16 DC127995 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
PBX0119F06 AW642614 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xl267h03 DC113987 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3475798 BG892793 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGp998H1914199 BX851515 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:8320325 DY554539 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:6631555 BU906546 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL088l05 BJ066933 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL048h17 BJ039113 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl316k16 DC092855 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL014m23 BJ046879 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl267h03 DC079122 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL090j07 BJ091963 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL220h10 BJ644365 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL202n20 BJ639631 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL048h17 BJ053854 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL088l05 BJ084273 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25