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Summary Expression Phenotypes Gene Literature (23) GO Terms (3) Nucleotides (218) Proteins (128) Interactants (284) Wiki
XB-GENEPAGE-962542

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ebf3 - All

RefSeq mRNAs(10)
Models - Gene (29)
Models - mRNA (42)
mRNAs (46)
ESTs (21)

RefSeq mRNAs (10)

Accession Version name Length Protein Species
XM_041570895 XP_041426829.1 transcription factor COE3-like isoform X1 3796 bp XP_041426829 X. laevis.S
XM_041570896 XP_041426830.1 transcription factor COE3-like isoform X3 3855 bp XP_041426830 X. laevis.S
XM_041570897 XP_041426831.1 transcription factor COE3-like isoform X6 3684 bp XP_041426831 X. laevis.S
XM_041570898 XP_041426832.1 transcription factor COE3-like isoform X9 3657 bp XP_041426832 X. laevis.S
XM_041570901 XP_041426835.1 transcription factor COE3-like isoform X8 2656 bp XP_041426835 X. laevis.S
XM_041570902 XP_041426836.1 transcription factor COE3-like isoform X13 2546 bp XP_041426836 X. laevis.S
XM_041570903 XP_041426837.1 transcription factor COE3 isoform X15 3614 bp XP_041426837 X. laevis.S
XM_041570904 XP_041426838.1 transcription factor COE3-like isoform X17 3467 bp XP_041426838 X. laevis.S
XM_041570905 XP_041426839.1 transcription factor COE3-like isoform X18 3526 bp XP_041426839 X. laevis.S
NM_001090332 transcription factor COE3 2721 bp NP_001083801 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.0 XBXT10g013717 X. tropicalis
NCBI 10.1 XBXL10_1g30297 X. laevis.L
NCBI 10.1 XBXL10_1g32576 X. laevis.S
ENSEMBL 10.0 ebf3 X. tropicalis
JGI 9.1 Xelaev18034571m.g X. laevis.L
JGI 9.1 Xelaev18036865m.g X. laevis.S
Xenbase 9.1 gene4587 X. tropicalis
Xenbase 9.2 gene7801 X. laevis.L
Xenbase 9.2 gene19352 X. laevis.S
ENSEMBL 9.1 ebf3 X. tropicalis
JGI 7.1 Xetro.G00370 X. tropicalis
JGI 7.2 Xelaev16072460m.g X. laevis.L
JGI 6.0 XeXenL6RMv10009874m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000011309 X. tropicalis
JGI 4.1 fgenesh_pm_kg.C_scaffold_32000002 X. tropicalis
JGI 4.1 e_gw1.32.106.1 X. tropicalis
JGI 4.1 e_gw1.32.11.1 X. tropicalis
JGI 4.1 e_gw1.32.27.1 X. tropicalis
JGI 4.1 e_gw1.32.6.1 X. tropicalis
JGI 4.1 e_gw1.32.89.1 X. tropicalis
JGI 4.1 gw1.32.106.1 X. tropicalis
JGI 4.1 gw1.32.11.1 X. tropicalis
JGI 4.1 gw1.32.27.1 X. tropicalis
JGI 4.1 gw1.32.6.1 X. tropicalis
JGI 4.1 gw1.32.89.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_32000021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_32000023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_32000024 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_32000004 X. tropicalis

mRNAs based on gene models(42)

Source Version Model Species
NCBI 10.0 mRNA067815 X. tropicalis
NCBI 10.1 XBmRNA57042 X. laevis.L
NCBI 10.1 XBmRNA61459 X. laevis.S
ENSEMBL 10.0 ENSXETT00000067029 X. tropicalis
ENSEMBL 10.0 ENSXETT00000024690 X. tropicalis
ENSEMBL 10.0 ENSXETT00000027874 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083466 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103657 X. tropicalis
JGI 9.1 Xelaev18034571m X. laevis.L
JGI 9.1 Xelaev18036865m X. laevis.S
Xenbase 9.1 rna14926 X. tropicalis
Xenbase 9.2 rna22768 X. laevis.L
Xenbase 9.2 rna56536 X. laevis.S
ENSEMBL 9.1 ENSXETT00000067029 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103657 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077833 X. tropicalis
ENSEMBL 9.1 ENSXETT00000024690 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083466 X. tropicalis
ENSEMBL 9.1 ENSXETT00000027874 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087816 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082140 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074875 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093021 X. tropicalis
JGI 7.1 Xetro.G00370.1 X. tropicalis
JGI 7.2 Xelaev16072460m X. laevis.L
JGI 6.0 XeXenL6RMv10009874m X. laevis.L
JGI 4.1 fgenesh_pm_kg.C_scaffold_32000002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000024690 X. tropicalis
JGI 4.1 e_gw1.32.106.1 X. tropicalis
JGI 4.1 e_gw1.32.11.1 X. tropicalis
JGI 4.1 e_gw1.32.27.1 X. tropicalis
JGI 4.1 e_gw1.32.6.1 X. tropicalis
JGI 4.1 e_gw1.32.89.1 X. tropicalis
JGI 4.1 gw1.32.106.1 X. tropicalis
JGI 4.1 gw1.32.11.1 X. tropicalis
JGI 4.1 gw1.32.27.1 X. tropicalis
JGI 4.1 gw1.32.6.1 X. tropicalis
JGI 4.1 gw1.32.89.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_32000021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_32000023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_32000024 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_32000004 X. tropicalis

mRNAs from cDNA libraries (46)

Clone Accession Species Library Anatomy Stage
TNeu112b17 CT030628 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7604756 BC157373 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XM_002932649 X. tropicalis
XM_002932648 X. tropicalis
XM_018095891 X. tropicalis
XM_004915825 X. tropicalis
XM_004915824 X. tropicalis
XM_004915822 X. tropicalis
XM_004915820 X. tropicalis
XM_004915819 X. tropicalis
XM_004915818 X. tropicalis
XM_004915817 X. tropicalis
XM_004915816 X. tropicalis
XM_004915812 X. tropicalis
XM_031905721 X. tropicalis
XM_031905720 X. tropicalis
XM_031905718 X. tropicalis
XM_031905717 X. tropicalis
XM_031905716 X. tropicalis
XM_031905715 X. tropicalis
XM_031905714 X. tropicalis
AF040994 AF040994 X. laevis.L
NM_001090332 X. laevis.L
IMAGE:9093642 BC170260 X. laevis.L
XM_018227396 X. laevis.S
XM_018227395 X. laevis.S
XM_018227392 X. laevis.S
XM_018227389 X. laevis.S
XM_018227388 X. laevis.S
XM_018227387 X. laevis.S
XM_018227386 X. laevis.S
XM_018227385 X. laevis.S
XM_018227384 X. laevis.S
XM_018227381 X. laevis.S
XM_018227378 X. laevis.S
KX011535 X. laevis.L
KX011534 X. laevis.L
XM_041570905 X. laevis.S
XM_041570904 X. laevis.S
XM_041570903 X. laevis.S
XM_041570902 X. laevis.S
XM_041570901 X. laevis.S
XM_041570898 X. laevis.S
XM_041570897 X. laevis.S
XM_041570896 X. laevis.S
XM_041570895 X. laevis.S

ESTs (21)

Clone Accession 5'/3' Species Library Anatomy Stage
xtbs21P01 CN082797 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7621631 CX342144 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7608305 CX409096 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7604756 CX412056 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7596627 CX337126 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA012i23 CR566218 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA009a07 CR564701 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA042j04 CR440900 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA071n21 BX727998 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu112b17 AL797568 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xtbs21P01 CN082796 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7604756 CX412055 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7608305 CX409095 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7621631 CX342143 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7596627 CX337125 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA012i23 CR566219 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA009a07 CR564702 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA042j04 CR440901 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu112b17 BX691412 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XL068h14 BJ062594 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL068h14 BJ080607 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25