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Summary Expression Phenotypes Gene Literature (0) GO Terms (17) Nucleotides (372) Proteins (87) Interactants (51) Wiki
XB-GENEPAGE-961702

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for cpsf6 - Xenopus laevis

RefSeq mRNAs(21)
Models - Gene (8)
Models - mRNA (8)
mRNAs (24)
ESTs (101)

RefSeq mRNAs (21)

Accession Version name Length Protein Species
XM_041587639 XM_041587639.1 XP_041443573.1 cleavage and polyadenylation specificity factor subunit 6 isoform X5 2173 bp XP_041443573 X. laevis.S
XM_018252448 XM_018252448.2 cleavage and polyadenylation specificity factor subunit 6-like isoform X3 2174 bp XP_018107937 X. laevis.L
XM_018252449 XM_018252449.2 cleavage and polyadenylation specificity factor subunit 6-like isoform X2 2177 bp XP_018107938 X. laevis.L
XM_018252451 XM_018252451.2 cleavage and polyadenylation specificity factor subunit 6-like isoform X4 2177 bp XP_018107940 X. laevis.L
XM_018252452 XM_018252452.2 cleavage and polyadenylation specificity factor subunit 6-like isoform X5 2173 bp XP_018107941 X. laevis.L
XM_018252453 XM_018252453.2 cleavage and polyadenylation specificity factor subunit 6-like isoform X6 2002 bp XP_018107942 X. laevis.L
XM_018252454 XM_018252454.2 cleavage and polyadenylation specificity factor subunit 6-like isoform X7 1997 bp XP_018107943 X. laevis.L
XM_018252455 XM_018252455.2 cleavage and polyadenylation specificity factor subunit 6-like isoform X8 2000 bp XP_018107944 X. laevis.L
NM_001093276 NM_001093276.1 cleavage and polyadenylation specificity factor subunit 6 3436 bp NP_001086745 X. laevis.S
XM_041587640 XM_041587640.1 XP_041443574.1 cleavage and polyadenylation specificity factor subunit 6 isoform X6 2154 bp XP_041443574 X. laevis.S
XM_041587641 XM_041587641.1 XP_041443575.1 cleavage and polyadenylation specificity factor subunit 6 isoform X7 2155 bp XP_041443575 X. laevis.S
XM_041587642 XM_041587642.1 XP_041443576.1 cleavage and polyadenylation specificity factor subunit 6 isoform X8 2152 bp XP_041443576 X. laevis.S
XM_041587643 XM_041587643.1 XP_041443577.1 cleavage and polyadenylation specificity factor subunit 6 isoform X9 2148 bp XP_041443577 X. laevis.S
XM_041587644 XM_041587644.1 XP_041443578.1 cleavage and polyadenylation specificity factor subunit 6 isoform X10 1889 bp XP_041443578 X. laevis.S
XM_041587645 XM_041587645.1 XP_041443579.1 cleavage and polyadenylation specificity factor subunit 6 isoform X11 2002 bp XP_041443579 X. laevis.S
XM_018252447 XM_018252447.2 cleavage and polyadenylation specificity factor subunit 6-like isoform X1 2179 bp XP_018107936 X. laevis.L
XM_041586346 XM_041586346.1 XP_041442280.1 cleavage and polyadenylation specificity factor subunit 6-like isoform X1 1768 bp XP_041442280 X. laevis.L
XM_041587635 XM_041587635.1 XP_041443569.1 cleavage and polyadenylation specificity factor subunit 6 isoform X1 2177 bp XP_041443569 X. laevis.S
XM_041587636 XM_041587636.1 XP_041443570.1 cleavage and polyadenylation specificity factor subunit 6 isoform X2 2173 bp XP_041443570 X. laevis.S
XM_041587637 XM_041587637.1 XP_041443571.1 cleavage and polyadenylation specificity factor subunit 6 isoform X3 2176 bp XP_041443571 X. laevis.S
XM_041587638 XM_041587638.1 XP_041443572.1 cleavage and polyadenylation specificity factor subunit 6 isoform X4 2174 bp XP_041443572 X. laevis.S

Models - Gene (8)

Source Version Model Species
NCBI 10.1 XBXL10_1g16254 X. laevis.S
NCBI 10.1 XBXL10_1g12584 X. laevis.L
JGI 9.1 Xelaev18021179m.g X. laevis.S
JGI 9.1 Xelaev18017540m.g X. laevis.L
Xenbase 9.2 gene15401 X. laevis.S
Xenbase 9.2 gene40718 X. laevis.L
JGI 7.2 Xelaev16059989m.g X. laevis.S
JGI 6.0 XeXenL6RMv10013057m.g X. laevis.S

mRNAs based on gene models(8)

Source Version Model Species
NCBI 10.1 XBmRNA23561 X. laevis.L
NCBI 10.1 XBmRNA30508 X. laevis.S
JGI 9.1 Xelaev18017540m X. laevis.L
JGI 9.1 Xelaev18021179m X. laevis.S
Xenbase 9.2 rna82851 X. laevis.L
Xenbase 9.2 rna44945 X. laevis.S
JGI 7.2 Xelaev16059989m X. laevis.S
JGI 6.0 XeXenL6RMv10013057m X. laevis.S

mRNAs from cDNA libraries (24)

Clone Accession Species Library Anatomy Stage
IMAGE:3377366 BC097816 X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6864420 BC077388 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:4684077 BC042306 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001093276 X. laevis.S
XM_018252455 X. laevis.L
XM_018252454 X. laevis.L
XM_018252453 X. laevis.L
XM_018252452 X. laevis.L
XM_018252451 X. laevis.L
XM_018252449 X. laevis.L
XM_018252448 X. laevis.L
XM_018252447 X. laevis.L
XM_041587645 X. laevis.S
XM_041587644 X. laevis.S
XM_041587643 X. laevis.S
XM_041587642 X. laevis.S
XM_041587641 X. laevis.S
XM_041587640 X. laevis.S
XM_041587639 X. laevis.S
XM_041587638 X. laevis.S
XM_041587637 X. laevis.S
XM_041587636 X. laevis.S
XM_041587635 X. laevis.S
XM_041586346 X. laevis.L

ESTs (101)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
xl338k14 DC134517 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl266c14 DC113600 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl292c07 DC120907 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl301j01 DC123537 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl323l04 DC130122 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl325l04 DC130750 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl259c08 DC111499 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl322d08 DC129660 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl247d09 DC107926 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk59j06ex DC035495 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk3j03ex DC053784 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk70g03ex DC057859 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
p18c5 AU245439 5' X. laevis.S Shibata Xenopus AEM lambda-ZAP II cDNA library endomesoderm NF stage 12.5 to NF stage 13
IMAGE:8640545 EB737391 5' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
IMAGE:8642159 EB734786 5' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
IMAGE:8643112 EB734263 5' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
IMAGE:8641119 EB732580 5' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
IMAGE:8540995 EB477961 5' X. laevis.S NICHD_XGC_olfb brain unspecified stage
IMAGE:8322311 DY564166 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7974336 DR727508 5' X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7979490 DR721216 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL463j02ex BP691112 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL445b04ex BP684138 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL443d04ex BP683511 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL408n22ex BP700480 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL487k16ex BP699419 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL407a02ex BP696307 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL470j03ex BP693435 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL431o01ex BP679442 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL427i19ex BP677675 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL421b15ex BP676157 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL415m04ex BP674094 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL410b13ex BP672271 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998C2414213 BX853950 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998J189039 BX845821 5' X. laevis.S Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
XL218n04 BJ627639 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL213j01 BJ626057 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL201m24 BJ622655 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL165c10 BJ613776 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL147d03 BJ094944 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL095o23 BJ071925 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL092o18 BJ071074 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL054a03 BJ069612 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL061j01 BJ059106 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL085j18 BJ066262 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL067e22 BJ060904 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL012j12 BJ029481 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL004g09 BJ030519 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL003i23 BJ030243 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4970029 CF290126 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6864420 CA987716 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6867639 CA981239 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6323288 CA971776 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6322902 CA971490 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:5156815 CA790446 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6636816 BU910918 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:4684077 BQ733510 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4084288 BI476990 5' X. laevis.S Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:4678197 BI477920 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3472632 BI313194 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
BG409985 BG409985 5' X. laevis.S Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
IMAGE:3751409 BG345873 5' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:3579867 BG162948 5' X. laevis.S Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:3579627 BG162900 5' X. laevis.S Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:3580165 BG160188 5' X. laevis.S Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:3377366 BE506151 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
PBX0127B09 AW643293 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0065E04 AW638042 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0022C07 AW634566 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl292c07 DC086130 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl322d08 DC093874 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl259c08 DC076785 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl285g24 DC084300 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk70g03ex DC024438 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk59j06ex DC002640 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8641119 EB738663 3' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
IMAGE:8640545 EB729354 3' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
XL408n22ex BP733247 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL407a02ex BP730054 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL443d04ex BP719590 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL431o01ex BP716314 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL428i19ex BP715073 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL427i19ex BP714779 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL421b15ex BP713491 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL415m04ex BP711818 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL218n04 BJ643936 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL201m24 BJ639334 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL150j04 BJ099411 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL147d03 BJ098574 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL054a03 BJ086742 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL085j18 BJ083586 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL067e22 BJ079117 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL061j01 BJ077622 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL003i23 BJ045250 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL012j12 BJ044211 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL004g09 BJ045508 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4084288 BI446751 3' X. laevis.S Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3474839 BI347801 3' X. laevis.S Wellcome CRC pcDNAI St10 5 whole organism NF stage 10.5
IMAGE:3751409 BG023492 3' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5