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XB-GENEPAGE-961276
Nucleotide sequences for trim9 - All
RefSeq mRNAs(18) |
Models - Gene (32) |
Models - mRNA (43) |
mRNAs (18) |
ESTs (2) |
RefSeq mRNAs (18)
Accession | Version | Protein Name | Length | Protein | Species |
XM_004917160 | XM_004917160.4 | E3 ubiquitin-protein ligase TRIM9 isoform X1 | 7466 bp | XP_004917217 | X. tropicalis |
XM_004917161 | XM_004917161.4 | E3 ubiquitin-protein ligase TRIM9 isoform X2 | 7430 bp | XP_004917218 | X. tropicalis |
XM_004917162 | XM_004917162.4 | E3 ubiquitin-protein ligase TRIM9 isoform X3 | 7355 bp | XP_004917219 | X. tropicalis |
XM_004917163 | XM_004917163.4 | E3 ubiquitin-protein ligase TRIM9 isoform X4 | 7244 bp | XP_004917220 | X. tropicalis |
XM_002936574 | XM_002936574.5 | E3 ubiquitin-protein ligase TRIM9 isoform X5 | 7208 bp | XP_002936620 | X. tropicalis |
XM_018230546 | XM_018230546.2 | E3 ubiquitin-protein ligase TRIM9 isoform X8 | 6838 bp | XP_018086035 | X. laevis.L |
XM_018232337 | XM_018232337.2 | E3 ubiquitin-protein ligase TRIM9 isoform X1 | 3273 bp | XP_018087826 | X. laevis.S |
XM_018232338 | XM_018232338.2 | E3 ubiquitin-protein ligase TRIM9 isoform X2 | 3236 bp | XP_018087827 | X. laevis.S |
XM_018232339 | XM_018232339.2 | E3 ubiquitin-protein ligase TRIM9 isoform X3 | 3162 bp | XP_018087828 | X. laevis.S |
XM_018232340 | XM_018232340.2 | E3 ubiquitin-protein ligase TRIM9 isoform X4 | 3051 bp | XP_018087829 | X. laevis.S |
XM_018232341 | XM_018232341.2 | E3 ubiquitin-protein ligase TRIM9 isoform X5 | 3014 bp | XP_018087830 | X. laevis.S |
XM_041573051 | XM_041573051.1 | XP_041428985.1 E3 ubiquitin-protein ligase TRIM9 isoform X2 | 7102 bp | XP_041428985 | X. laevis.L |
XM_041573052 | XM_041573052.1 | XP_041428986.1 E3 ubiquitin-protein ligase TRIM9 isoform X3 | 7089 bp | XP_041428986 | X. laevis.L |
XM_041573053 | XM_041573053.1 | XP_041428987.1 E3 ubiquitin-protein ligase TRIM9 isoform X6 | 6988 bp | XP_041428987 | X. laevis.L |
XM_018230541 | XM_018230541.2 | E3 ubiquitin-protein ligase TRIM9 isoform X1 | 7121 bp | XP_018086030 | X. laevis.L |
XM_018230542 | XM_018230542.2 | E3 ubiquitin-protein ligase TRIM9 isoform X4 | 7080 bp | XP_018086031 | X. laevis.L |
XM_018230543 | XM_018230543.2 | E3 ubiquitin-protein ligase TRIM9 isoform X5 | 7009 bp | XP_018086032 | X. laevis.L |
XM_018230545 | XM_018230545.2 | E3 ubiquitin-protein ligase TRIM9 isoform X7 | 6891 bp | XP_018086034 | X. laevis.L |
Models - Gene (32)
Source | Version | Model | Species |
NCBI | 10.0 | XBXT10g018773 | X. tropicalis |
NCBI | 10.1 | XBXL10_1g35897 | X. laevis.L |
NCBI | 10.1 | XBXL10_1g37278 | X. laevis.S |
ENSEMBL | 10.0 | trim9 | X. tropicalis |
JGI | 9.1 | Xelaev18039675m.g | X. laevis.L |
JGI | 9.1 | Xelaev18041209m.g | X. laevis.S |
Xenbase | 9.1 | gene18104 | X. tropicalis |
Xenbase | 9.2 | gene18197 | X. laevis.L |
Xenbase | 9.2 | gene1569 | X. laevis.S |
ENSEMBL | 9.1 | trim9 | X. tropicalis |
JGI | 6.0 | XeXenL6RMv10019138m.g | X. laevis.L |
ENSEMBL | 4.1 | ENSXETG00000016487 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_222000016 | X. tropicalis |
JGI | 4.1 | e_gw1.222.107.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.125.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.2.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.31.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.37.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.38.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.61.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.67.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.73.1 | X. tropicalis |
JGI | 4.1 | gw1.222.107.1 | X. tropicalis |
JGI | 4.1 | gw1.222.125.1 | X. tropicalis |
JGI | 4.1 | gw1.222.2.1 | X. tropicalis |
JGI | 4.1 | gw1.222.67.1 | X. tropicalis |
JGI | 4.1 | gw1.222.73.1 | X. tropicalis |
JGI | 4.1 | gw1.222.31.1 | X. tropicalis |
JGI | 4.1 | gw1.222.37.1 | X. tropicalis |
JGI | 4.1 | gw1.222.38.1 | X. tropicalis |
JGI | 4.1 | gw1.222.61.1 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_222000046 | X. tropicalis |
mRNAs based on gene models(43)
Source | Version | Model | Species |
NCBI | 10.0 | mRNA092750 | X. tropicalis |
NCBI | 10.1 | XBmRNA67815 | X. laevis.L |
NCBI | 10.1 | XBmRNA70361 | X. laevis.S |
ENSEMBL | 10.0 | ENSXETT00000069381 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000035960 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000102939 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000072603 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000100686 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000100017 | X. tropicalis |
JGI | 9.1 | Xelaev18039675m | X. laevis.L |
JGI | 9.1 | Xelaev18041209m | X. laevis.S |
Xenbase | 9.1 | rna38647 | X. tropicalis |
Xenbase | 9.2 | rna53164 | X. laevis.L |
Xenbase | 9.2 | rna4586 | X. laevis.S |
ENSEMBL | 9.1 | ENSXETT00000069381 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000035960 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000100686 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000102939 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000072603 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000100017 | X. tropicalis |
JGI | 6.0 | XeXenL6RMv10019138m | X. laevis.L |
JGI | 4.1 | fgenesh1_pm.C_scaffold_222000016 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000035958 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000035960 | X. tropicalis |
JGI | 4.1 | e_gw1.222.107.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.125.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.2.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.31.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.37.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.38.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.61.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.67.1 | X. tropicalis |
JGI | 4.1 | e_gw1.222.73.1 | X. tropicalis |
JGI | 4.1 | gw1.222.107.1 | X. tropicalis |
JGI | 4.1 | gw1.222.125.1 | X. tropicalis |
JGI | 4.1 | gw1.222.2.1 | X. tropicalis |
JGI | 4.1 | gw1.222.67.1 | X. tropicalis |
JGI | 4.1 | gw1.222.73.1 | X. tropicalis |
JGI | 4.1 | gw1.222.31.1 | X. tropicalis |
JGI | 4.1 | gw1.222.37.1 | X. tropicalis |
JGI | 4.1 | gw1.222.38.1 | X. tropicalis |
JGI | 4.1 | gw1.222.61.1 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_222000046 | X. tropicalis |
mRNAs from cDNA libraries (18)
Clone | Accession | Species | Library | Anatomy | Stage |
XM_002936574 | X. tropicalis | ||||
XM_004917163 | X. tropicalis | ||||
XM_004917162 | X. tropicalis | ||||
XM_004917161 | X. tropicalis | ||||
XM_004917160 | X. tropicalis | ||||
XM_018232341 | X. laevis.S | ||||
XM_018232340 | X. laevis.S | ||||
XM_018232339 | X. laevis.S | ||||
XM_018232338 | X. laevis.S | ||||
XM_018232337 | X. laevis.S | ||||
XM_018230546 | X. laevis.L | ||||
XM_018230545 | X. laevis.L | ||||
XM_018230543 | X. laevis.L | ||||
XM_018230542 | X. laevis.L | ||||
XM_018230541 | X. laevis.L | ||||
XM_041573053 | X. laevis.L | ||||
XM_041573052 | X. laevis.L | ||||
XM_041573051 | X. laevis.L |
ESTs (2)
Clone | Accession | 5'/3' | Species | Library | Anatomy | Stage |
TGas139d12 | AL972955 | 5' | X. tropicalis | XGC-gastrula | whole organism | NF stage 10.5 to NF stage 12 |
IMAGE:7641644 | CX795756 | 3' | X. tropicalis | NIH_XGC_tropBrn2 | brain | frog |