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Summary Expression Phenotypes Gene Literature (42) GO Terms (4) Nucleotides (125) Proteins (86) Interactants (214) Wiki
XB-GENEPAGE-961276

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for trim9 - All

RefSeq mRNAs(18)
Models - Gene (32)
Models - mRNA (43)
mRNAs (18)
ESTs (2)

RefSeq mRNAs (18)

Accession Version Protein Name Length Protein Species
XM_004917160 XM_004917160.4 E3 ubiquitin-protein ligase TRIM9 isoform X1 7466 bp XP_004917217 X. tropicalis
XM_004917161 XM_004917161.4 E3 ubiquitin-protein ligase TRIM9 isoform X2 7430 bp XP_004917218 X. tropicalis
XM_004917162 XM_004917162.4 E3 ubiquitin-protein ligase TRIM9 isoform X3 7355 bp XP_004917219 X. tropicalis
XM_004917163 XM_004917163.4 E3 ubiquitin-protein ligase TRIM9 isoform X4 7244 bp XP_004917220 X. tropicalis
XM_002936574 XM_002936574.5 E3 ubiquitin-protein ligase TRIM9 isoform X5 7208 bp XP_002936620 X. tropicalis
XM_018230546 XM_018230546.2 E3 ubiquitin-protein ligase TRIM9 isoform X8 6838 bp XP_018086035 X. laevis.L
XM_018232337 XM_018232337.2 E3 ubiquitin-protein ligase TRIM9 isoform X1 3273 bp XP_018087826 X. laevis.S
XM_018232338 XM_018232338.2 E3 ubiquitin-protein ligase TRIM9 isoform X2 3236 bp XP_018087827 X. laevis.S
XM_018232339 XM_018232339.2 E3 ubiquitin-protein ligase TRIM9 isoform X3 3162 bp XP_018087828 X. laevis.S
XM_018232340 XM_018232340.2 E3 ubiquitin-protein ligase TRIM9 isoform X4 3051 bp XP_018087829 X. laevis.S
XM_018232341 XM_018232341.2 E3 ubiquitin-protein ligase TRIM9 isoform X5 3014 bp XP_018087830 X. laevis.S
XM_041573051 XM_041573051.1 XP_041428985.1 E3 ubiquitin-protein ligase TRIM9 isoform X2 7102 bp XP_041428985 X. laevis.L
XM_041573052 XM_041573052.1 XP_041428986.1 E3 ubiquitin-protein ligase TRIM9 isoform X3 7089 bp XP_041428986 X. laevis.L
XM_041573053 XM_041573053.1 XP_041428987.1 E3 ubiquitin-protein ligase TRIM9 isoform X6 6988 bp XP_041428987 X. laevis.L
XM_018230541 XM_018230541.2 E3 ubiquitin-protein ligase TRIM9 isoform X1 7121 bp XP_018086030 X. laevis.L
XM_018230542 XM_018230542.2 E3 ubiquitin-protein ligase TRIM9 isoform X4 7080 bp XP_018086031 X. laevis.L
XM_018230543 XM_018230543.2 E3 ubiquitin-protein ligase TRIM9 isoform X5 7009 bp XP_018086032 X. laevis.L
XM_018230545 XM_018230545.2 E3 ubiquitin-protein ligase TRIM9 isoform X7 6891 bp XP_018086034 X. laevis.L

Models - Gene (32)

Source Version Model Species
NCBI 10.0 XBXT10g018773 X. tropicalis
NCBI 10.1 XBXL10_1g35897 X. laevis.L
NCBI 10.1 XBXL10_1g37278 X. laevis.S
ENSEMBL 10.0 trim9 X. tropicalis
JGI 9.1 Xelaev18039675m.g X. laevis.L
JGI 9.1 Xelaev18041209m.g X. laevis.S
Xenbase 9.1 gene18104 X. tropicalis
Xenbase 9.2 gene18197 X. laevis.L
Xenbase 9.2 gene1569 X. laevis.S
ENSEMBL 9.1 trim9 X. tropicalis
JGI 6.0 XeXenL6RMv10019138m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000016487 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_222000016 X. tropicalis
JGI 4.1 e_gw1.222.107.1 X. tropicalis
JGI 4.1 e_gw1.222.125.1 X. tropicalis
JGI 4.1 e_gw1.222.2.1 X. tropicalis
JGI 4.1 e_gw1.222.31.1 X. tropicalis
JGI 4.1 e_gw1.222.37.1 X. tropicalis
JGI 4.1 e_gw1.222.38.1 X. tropicalis
JGI 4.1 e_gw1.222.61.1 X. tropicalis
JGI 4.1 e_gw1.222.67.1 X. tropicalis
JGI 4.1 e_gw1.222.73.1 X. tropicalis
JGI 4.1 gw1.222.107.1 X. tropicalis
JGI 4.1 gw1.222.125.1 X. tropicalis
JGI 4.1 gw1.222.2.1 X. tropicalis
JGI 4.1 gw1.222.67.1 X. tropicalis
JGI 4.1 gw1.222.73.1 X. tropicalis
JGI 4.1 gw1.222.31.1 X. tropicalis
JGI 4.1 gw1.222.37.1 X. tropicalis
JGI 4.1 gw1.222.38.1 X. tropicalis
JGI 4.1 gw1.222.61.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_222000046 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
NCBI 10.0 mRNA092750 X. tropicalis
NCBI 10.1 XBmRNA67815 X. laevis.L
NCBI 10.1 XBmRNA70361 X. laevis.S
ENSEMBL 10.0 ENSXETT00000069381 X. tropicalis
ENSEMBL 10.0 ENSXETT00000035960 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102939 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072603 X. tropicalis
ENSEMBL 10.0 ENSXETT00000100686 X. tropicalis
ENSEMBL 10.0 ENSXETT00000100017 X. tropicalis
JGI 9.1 Xelaev18039675m X. laevis.L
JGI 9.1 Xelaev18041209m X. laevis.S
Xenbase 9.1 rna38647 X. tropicalis
Xenbase 9.2 rna53164 X. laevis.L
Xenbase 9.2 rna4586 X. laevis.S
ENSEMBL 9.1 ENSXETT00000069381 X. tropicalis
ENSEMBL 9.1 ENSXETT00000035960 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100686 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102939 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072603 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100017 X. tropicalis
JGI 6.0 XeXenL6RMv10019138m X. laevis.L
JGI 4.1 fgenesh1_pm.C_scaffold_222000016 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035958 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035960 X. tropicalis
JGI 4.1 e_gw1.222.107.1 X. tropicalis
JGI 4.1 e_gw1.222.125.1 X. tropicalis
JGI 4.1 e_gw1.222.2.1 X. tropicalis
JGI 4.1 e_gw1.222.31.1 X. tropicalis
JGI 4.1 e_gw1.222.37.1 X. tropicalis
JGI 4.1 e_gw1.222.38.1 X. tropicalis
JGI 4.1 e_gw1.222.61.1 X. tropicalis
JGI 4.1 e_gw1.222.67.1 X. tropicalis
JGI 4.1 e_gw1.222.73.1 X. tropicalis
JGI 4.1 gw1.222.107.1 X. tropicalis
JGI 4.1 gw1.222.125.1 X. tropicalis
JGI 4.1 gw1.222.2.1 X. tropicalis
JGI 4.1 gw1.222.67.1 X. tropicalis
JGI 4.1 gw1.222.73.1 X. tropicalis
JGI 4.1 gw1.222.31.1 X. tropicalis
JGI 4.1 gw1.222.37.1 X. tropicalis
JGI 4.1 gw1.222.38.1 X. tropicalis
JGI 4.1 gw1.222.61.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_222000046 X. tropicalis

mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
XM_002936574 X. tropicalis
XM_004917163 X. tropicalis
XM_004917162 X. tropicalis
XM_004917161 X. tropicalis
XM_004917160 X. tropicalis
XM_018232341 X. laevis.S
XM_018232340 X. laevis.S
XM_018232339 X. laevis.S
XM_018232338 X. laevis.S
XM_018232337 X. laevis.S
XM_018230546 X. laevis.L
XM_018230545 X. laevis.L
XM_018230543 X. laevis.L
XM_018230542 X. laevis.L
XM_018230541 X. laevis.L
XM_041573053 X. laevis.L
XM_041573052 X. laevis.L
XM_041573051 X. laevis.L

ESTs (2)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas139d12 AL972955 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7641644 CX795756 3' X. tropicalis NIH_XGC_tropBrn2 brain frog