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Summary Expression Phenotypes Gene Literature (0) GO Terms (18) Nucleotides (102) Proteins (49) Interactants (14) Wiki
XB-GENEPAGE-960399

Show:     All X. tropicalis X. laevis

Nucleotide sequences for nrde2 - All

RefSeq mRNAs(5)
Models - Gene (26)
Models - mRNA (32)
mRNAs (7)
ESTs (17)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001079399 NM_001079399.1 nuclear exosome regulator NRDE2 3601 bp NP_001072867 X. tropicalis
XM_031890600 XM_031890600.1 XP_031746460.1 nuclear exosome regulator NRDE2 isoform X1 4089 bp XP_031746460 X. tropicalis
XM_031890601 XM_031890601.1 XP_031746461.1 nuclear exosome regulator NRDE2 isoform X2 3654 bp XP_031746461 X. tropicalis
NM_001091502 NM_001091502.1 NRDE-2, necessary for RNA interference, domain containing L homeolog 3564 bp NP_001084971 X. laevis.L
XM_018228841 XM_018228841.2 NRDE-2, necessary for RNA interference, domain containing L homeolog isoform X1 3603 bp XP_018084330 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g35768 X. laevis.L
NCBI 10.0 XBXT10g007643 X. tropicalis
ENSEMBL 10.0 nrde2 X. tropicalis
Xenbase 9.2 gene11193 X. laevis.L
JGI 9.1 Xelaev18039533m.g X. laevis.L
Xenbase 9.1 gene33586 X. tropicalis
ENSEMBL 9.1 nrde2 X. tropicalis
JGI 8.0 Xetrov14034513m.g X. tropicalis
JGI 7.2 Xelaev16050609m.g X. laevis.L
JGI 7.1 Xetro.H01230 X. tropicalis
JGI 6.0 XeXenL6RMv10011042m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000015708 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_49000014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_49000057 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_490013 X. tropicalis
JGI 4.1 e_gw1.49.152.1 X. tropicalis
JGI 4.1 e_gw1.49.187.1 X. tropicalis
JGI 4.1 e_gw1.49.190.1 X. tropicalis
JGI 4.1 gw1.49.152.1 X. tropicalis
JGI 4.1 gw1.49.187.1 X. tropicalis
JGI 4.1 gw1.49.190.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_490022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490152 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490187 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490190 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_490056 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.1 XBmRNA67561 X. laevis.L
ENSEMBL 10.0 ENSXETT00000073554 X. tropicalis
ENSEMBL 10.0 ENSXETT00000060731 X. tropicalis
NCBI 10.0 mRNA037844 X. tropicalis
Xenbase 9.2 rna32525 X. laevis.L
ENSEMBL 9.1 ENSXETT00000034250 X. tropicalis
ENSEMBL 9.1 ENSXETT00000060731 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073554 X. tropicalis
Xenbase 9.1 rna63282 X. tropicalis
JGI 9.1 Xelaev18039533m X. laevis.L
ENSEMBL 9.1 ENSXETT00000098640 X. tropicalis
JGI 8.0 Xetrov14034513m X. tropicalis
JGI 7.2 Xelaev16050609m X. laevis.L
JGI 7.1 Xetro.H01230.2 X. tropicalis
JGI 7.1 Xetro.H01230.1 X. tropicalis
JGI 7.1 Xetro.H01230.3 X. tropicalis
JGI 6.0 XeXenL6RMv10011042m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_49000057 X. tropicalis
JGI 4.1 e_gw1.49.187.1 X. tropicalis
JGI 4.1 e_gw1.49.190.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000034250 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_490056 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_490013 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_490022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490152 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490187 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490190 X. tropicalis
JGI 4.1 e_gw1.49.152.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_49000014 X. tropicalis
JGI 4.1 gw1.49.152.1 X. tropicalis
JGI 4.1 gw1.49.187.1 X. tropicalis
JGI 4.1 gw1.49.190.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7687281 BC123943 X. tropicalis NIH_XGC_tropTe4 testis frog
NM_001079399 X. tropicalis
XM_031890600 X. tropicalis
XM_031890601 X. tropicalis
IMAGE:6642897 BC070786 X. laevis.L
NM_001091502 X. laevis.L
XM_018228841 X. laevis.L

ESTs (17)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7687281 CX908922 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8910896 EL810288 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7692587 CX919096 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7805524 DR842138 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7695188 CX923817 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7594603 CX331312 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN11868 CX928084 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692587 CX919095 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8910896 EL810289 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7594603 CX331311 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7687281 CX908921 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695188 CX923816 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11868 CX928083 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7805524 DR842137 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8529504 EB477876 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
PBX0111A08 AW641840 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4960386 BM192063 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32