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Summary Expression Phenotypes Gene Literature (8) GO Terms (1) Nucleotides (100) Proteins (48) Interactants (244) Wiki
XB-GENEPAGE-958758

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ubp1 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (16)
Models - mRNA (18)
mRNAs (3)
ESTs (3)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001011473 NM_001011473.1 upstream binding protein 1 2244 bp NP_001011473 X. tropicalis
XM_012971725 XM_012971725.3 upstream binding protein 1 isoform X1 1794 bp XP_012827179 X. tropicalis

Models - Gene (16)

Source Version Model Species
NCBI 10.0 XBXT10g015403 X. tropicalis
ENSEMBL 10.0 ubp1 X. tropicalis
Xenbase 9.1 gene5421 X. tropicalis
ENSEMBL 9.1 ubp1 X. tropicalis
JGI 8.0 Xetrov14041396m.g X. tropicalis
JGI 7.1 Xetro.J00797 X. tropicalis
ENSEMBL 4.1 ENSXETG00000023707 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_686000010 X. tropicalis
JGI 4.1 e_gw1.686.29.1 X. tropicalis
JGI 4.1 e_gw1.686.3.1 X. tropicalis
JGI 4.1 e_gw1.686.71.1 X. tropicalis
JGI 4.1 gw1.686.29.1 X. tropicalis
JGI 4.1 gw1.686.3.1 X. tropicalis
JGI 4.1 gw1.686.71.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_686000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_686000011 X. tropicalis

mRNAs based on gene models(18)

Source Version Model Species
NCBI 10.0 mRNA076229 X. tropicalis
ENSEMBL 10.0 ENSXETT00000040787 X. tropicalis
Xenbase 9.1 rna17572 X. tropicalis
ENSEMBL 9.1 ENSXETT00000051143 X. tropicalis
ENSEMBL 9.1 ENSXETT00000040787 X. tropicalis
JGI 8.0 Xetrov14041396m X. tropicalis
JGI 7.1 Xetro.J00797.2 X. tropicalis
JGI 7.1 Xetro.J00797.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_686000010 X. tropicalis
ENSEMBL 4.1 ENSXETT00000051143 X. tropicalis
JGI 4.1 e_gw1.686.29.1 X. tropicalis
JGI 4.1 e_gw1.686.3.1 X. tropicalis
JGI 4.1 e_gw1.686.71.1 X. tropicalis
JGI 4.1 gw1.686.29.1 X. tropicalis
JGI 4.1 gw1.686.3.1 X. tropicalis
JGI 4.1 gw1.686.71.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_686000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_686000011 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
NM_001011473 X. tropicalis
IMAGE:6994252 BC088609 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
XM_012971725 X. tropicalis

ESTs (3)

Clone Accession 5'/3' Species Library Anatomy Stage
st44b23 DC177677 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st13c02 DC166526 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:6994252 CF237614 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19