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Summary Expression Phenotypes Gene Literature (3) GO Terms (22) Nucleotides (163) Proteins (60) Interactants (73) Wiki
XB-GENEPAGE-958480

Show:     All X. tropicalis X. laevis

Nucleotide sequences for prdm4 - All

RefSeq mRNAs(9)
Models - Gene (33)
Models - mRNA (38)
mRNAs (13)
ESTs (51)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
NM_001078789 NM_001078789.1 PR domain zinc finger protein 4 2993 bp NP_001072257 X. tropicalis
XM_018092153 XM_018092153.2 PR domain zinc finger protein 4 isoform X1 3125 bp XP_017947642 X. tropicalis
XM_018092154 XM_018092154.2 PR domain zinc finger protein 4 isoform X1 3108 bp XP_017947643 X. tropicalis
XM_018092155 XM_018092155.2 PR domain zinc finger protein 4 isoform X1 3103 bp XP_017947644 X. tropicalis
NM_001086711 NM_001086711.1 PR domain 4 L homeolog 2945 bp NP_001080180 X. laevis.L
XM_041584945 XM_041584945.1 XP_041440879.1 PR domain 4 L homeolog isoform X1 3156 bp XP_041440879 X. laevis.L
XM_041584946 XM_041584946.1 XP_041440880.1 PR domain 4 L homeolog isoform X2 2885 bp XP_041440880 X. laevis.L
XM_041584947 XM_041584947.1 XP_041440881.1 PR domain 4 L homeolog isoform X3 2601 bp XP_041440881 X. laevis.L
XM_018254793 XM_018254793.2 PR domain zinc finger protein 4 3191 bp XP_018110282 X. laevis.S

Models - Gene (33)

Source Version Model Species
NCBI 10.1 XBXL10_1g15036 X. laevis.S
NCBI 10.1 XBXL10_1g11511 X. laevis.L
NCBI 10.0 XBXT10g011450 X. tropicalis
ENSEMBL 10.0 prdm4 X. tropicalis
Xenbase 9.2 gene42783 X. laevis.S
Xenbase 9.2 gene48596 X. laevis.L
JGI 9.1 Xelaev18019823m.g X. laevis.S
JGI 9.1 Xelaev18002489m.g X. laevis.L
Xenbase 9.1 gene32252 X. tropicalis
ENSEMBL 9.1 gk X. tropicalis
JGI 8.0 Xetrov14016114m.g X. tropicalis
JGI 7.2 Xelaev16080708m.g X. laevis.L
JGI 7.1 Xetro.D01698 X. tropicalis
JGI 6.0 XeXenL6RMv10048692m.g X. laevis.L
JGI 6.0 XeXenL6RMv10002645m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000011529 X. tropicalis
JGI 4.1 gw1.601.73.1 X. tropicalis
JGI 4.1 gw1.601.46.1 X. tropicalis
JGI 4.1 e_gw1.601.1.1 X. tropicalis
JGI 4.1 e_gw1.601.108.1 X. tropicalis
JGI 4.1 e_gw1.601.109.1 X. tropicalis
JGI 4.1 e_gw1.601.110.1 X. tropicalis
JGI 4.1 e_gw1.601.113.1 X. tropicalis
JGI 4.1 e_gw1.601.119.1 X. tropicalis
JGI 4.1 e_gw1.601.46.1 X. tropicalis
JGI 4.1 e_gw1.601.73.1 X. tropicalis
JGI 4.1 gw1.601.1.1 X. tropicalis
JGI 4.1 gw1.601.108.1 X. tropicalis
JGI 4.1 gw1.601.109.1 X. tropicalis
JGI 4.1 gw1.601.110.1 X. tropicalis
JGI 4.1 gw1.601.113.1 X. tropicalis
JGI 4.1 gw1.601.119.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_601000011 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.1 XBmRNA28001 X. laevis.S
NCBI 10.1 XBmRNA21598 X. laevis.L
NCBI 10.0 mRNA056872 X. tropicalis
ENSEMBL 10.0 ENSXETT00000061077 X. tropicalis
ENSEMBL 10.0 ENSXETT00000077957 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107291 X. tropicalis
Xenbase 9.2 rna94226 X. laevis.L
Xenbase 9.2 rna85833 X. laevis.S
Xenbase 9.1 rna61090 X. tropicalis
JGI 9.1 Xelaev18019823m X. laevis.S
ENSEMBL 9.1 ENSXETT00000077957 X. tropicalis
JGI 9.1 Xelaev18002489m X. laevis.L
ENSEMBL 9.1 ENSXETT00000061077 X. tropicalis
JGI 8.0 Xetrov14016114m X. tropicalis
JGI 7.2 Xelaev16080708m X. laevis.L
JGI 7.1 Xetro.D01698.2 X. tropicalis
JGI 7.1 Xetro.D01698.3 X. tropicalis
JGI 7.1 Xetro.D01698.1 X. tropicalis
JGI 6.0 XeXenL6RMv10002645m X. laevis.L
JGI 6.0 XeXenL6RMv10048692m X. laevis.L
JGI 4.1 gw1.601.113.1 X. tropicalis
JGI 4.1 e_gw1.601.109.1 X. tropicalis
JGI 4.1 e_gw1.601.1.1 X. tropicalis
JGI 4.1 e_gw1.601.110.1 X. tropicalis
JGI 4.1 e_gw1.601.113.1 X. tropicalis
JGI 4.1 e_gw1.601.119.1 X. tropicalis
JGI 4.1 e_gw1.601.46.1 X. tropicalis
JGI 4.1 e_gw1.601.73.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025214 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_601000011 X. tropicalis
JGI 4.1 gw1.601.108.1 X. tropicalis
JGI 4.1 gw1.601.109.1 X. tropicalis
JGI 4.1 gw1.601.1.1 X. tropicalis
JGI 4.1 gw1.601.110.1 X. tropicalis
JGI 4.1 e_gw1.601.108.1 X. tropicalis
JGI 4.1 gw1.601.119.1 X. tropicalis
JGI 4.1 gw1.601.46.1 X. tropicalis
JGI 4.1 gw1.601.73.1 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
IMAGE:7654339 BC121241 X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas066h01 CR942556 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001078789 X. tropicalis
XM_018092153 X. tropicalis
XM_018092154 X. tropicalis
XM_018092155 X. tropicalis
IMAGE:4889606 BC043864 X. laevis.L NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
IMAGE:4175836 BC108880 X. laevis.L
NM_001086711 X. laevis.L
XM_041584945 X. laevis.L
XM_041584946 X. laevis.L
XM_041584947 X. laevis.L
XM_018254793 X. laevis.S

ESTs (51)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7654339 CX823581 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7688074 CX910886 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693582 CX920770 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691493 CX917036 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695650 CX925107 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu062i01 AL674185 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7659440 CX838999 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7093831 CK654764 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7694046 CX921367 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas066h01 AL681562 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7687428 CX909293 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11965 CX928265 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687769 CX909689 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11965 CX928264 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693582 CX920769 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7654339 CX823580 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659440 CX838998 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7687428 CX909292 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687769 CX909688 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688074 CX910885 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691493 CX917035 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu062i01 BX686269 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7695650 CX925106 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas066h01 BX746748 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7694046 CX921366 3' X. tropicalis NIH_XGC_tropTe4 testis frog
XL189p24 BJ619653 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
PBX0014E01 AW633977 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0015G12 AW634084 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0064G12 AW637985 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3431907 BG345420 5' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:6637385 BU911411 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998K1714214 BX848378 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6865817 CA793782 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xl302p20 DC123923 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL150n02 BJ095588 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL170i21 BJ615094 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
PBX0014C02 AW633957 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3747814 BE680394 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL489e15ex BP699981 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL513p07ex BP705121 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk151m17ex DC052284 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:6939770 CB983811 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:8528414 EB476396 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL513p07ex BP737766 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL489e15ex BP732827 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL189p24 BJ636284 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL170i21 BJ631756 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL150n02 BJ099483 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxl291c21 DC085881 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3431907 BG038443 3' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
AW764864 AW764864 3' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24