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Summary Expression Phenotypes Gene Literature (0) GO Terms (1) Nucleotides (104) Proteins (50) Interactants (6) Wiki
XB-GENEPAGE-958244

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for tm6sf1 - All

RefSeq mRNAs(4)
Models - Gene (24)
Models - mRNA (26)
mRNAs (9)
ESTs (11)

RefSeq mRNAs (4)

Accession Version name Length Protein Species
NM_001079358 NM_001079358.1 transmembrane 6 superfamily member 1 1784 bp NP_001072826 X. tropicalis
XM_018255387 XM_018255387.2 XP_018110876.1 transmembrane 6 superfamily member 1 isoform X1 1724 bp XP_018110876 X. laevis.S
XM_041588276 XM_041588276.1 XP_041444210.1 transmembrane 6 superfamily member 1 isoform X2 1777 bp XP_041444210 X. laevis.S
NM_001093587 NM_001093587.1 transmembrane 6 superfamily member 1 1972 bp NP_001087056 X. laevis.L

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g010417 X. tropicalis
NCBI 10.1 XBXL10_1g13251 X. laevis.L
NCBI 10.1 XBXL10_1g15687 X. laevis.S
ENSEMBL 10.0 tm6sf1 X. tropicalis
JGI 9.1 Xelaev18018271m.g X. laevis.L
JGI 9.1 Xelaev18020588m.g X. laevis.S
Xenbase 9.1 gene4204 X. tropicalis
Xenbase 9.2 gene18393 X. laevis.L
ENSEMBL 9.1 tm6sf1 X. tropicalis
JGI 8.0 Xetrov14013457m.g X. tropicalis
JGI 7.1 Xetro.C00626 X. tropicalis
JGI 7.2 Xelaev16078729m.g X. laevis.L
JGI 6.0 XeXenL6RMv10001206m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000025132 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_562000001 X. tropicalis
JGI 4.1 e_gw1.562.15.1 X. tropicalis
JGI 4.1 e_gw1.562.24.1 X. tropicalis
JGI 4.1 e_gw1.562.35.1 X. tropicalis
JGI 4.1 gw1.562.15.1 X. tropicalis
JGI 4.1 gw1.562.24.1 X. tropicalis
JGI 4.1 gw1.562.35.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_562000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_562000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_562000001 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.0 mRNA051530 X. tropicalis
NCBI 10.1 XBmRNA25122 X. laevis.L
NCBI 10.1 XBmRNA29307 X. laevis.S
ENSEMBL 10.0 ENSXETT00000123023 X. tropicalis
ENSEMBL 10.0 ENSXETT00000053849 X. tropicalis
JGI 9.1 Xelaev18018271m X. laevis.L
JGI 9.1 Xelaev18020588m X. laevis.S
Xenbase 9.1 rna13733 X. tropicalis
Xenbase 9.2 rna53730 X. laevis.L
ENSEMBL 9.1 ENSXETT00000053849 X. tropicalis
JGI 8.0 Xetrov14013457m X. tropicalis
JGI 7.1 Xetro.C00626.2 X. tropicalis
JGI 7.1 Xetro.C00626.1 X. tropicalis
JGI 7.2 Xelaev16078729m X. laevis.L
JGI 6.0 XeXenL6RMv10001206m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_562000001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053849 X. tropicalis
JGI 4.1 e_gw1.562.15.1 X. tropicalis
JGI 4.1 e_gw1.562.24.1 X. tropicalis
JGI 4.1 e_gw1.562.35.1 X. tropicalis
JGI 4.1 gw1.562.15.1 X. tropicalis
JGI 4.1 gw1.562.24.1 X. tropicalis
JGI 4.1 gw1.562.35.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_562000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_562000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_562000001 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
NM_001079358 X. tropicalis
IMAGE:7866720 BC121709 X. tropicalis
IMAGE:7732185 BC160549 X. tropicalis
XM_031898090 X. tropicalis
XM_031898089 X. tropicalis
IMAGE:5516169 BC077954 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001093587 X. laevis.L
XM_041588276 X. laevis.S
XM_018255387 X. laevis.S

ESTs (11)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8922985 EL673977 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7786607 CX328038 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7698469 CX930385 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8922985 EL673976 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7698469 CX930384 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7786607 CX328037 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XL110k02 BJ074028 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL105m01 BJ068102 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5516169 CF286479 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL110k02 BJ090950 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL105m01 BJ085388 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25