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Summary Expression Phenotypes Gene Literature (2) GO Terms (6) Nucleotides (169) Proteins (55) Interactants (38) Wiki
XB-GENEPAGE-957547

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for trmt5 - Xenopus tropicalis

RefSeq mRNAs(3)
Models - Gene (24)
Models - mRNA (27)
mRNAs (4)
ESTs (30)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
XM_002939476 XM_002939476.5 tRNA (guanine(37)-N1)-methyltransferase isoform X2 1669 bp XP_002939522 X. tropicalis
XM_031890757 XM_031890757.1 XP_031746617.1 tRNA (guanine(37)-N1)-methyltransferase isoform X3 1687 bp XP_031746617 X. tropicalis
XM_004917211 XM_004917211.4 tRNA (guanine(37)-N1)-methyltransferase isoform X1 1666 bp XP_004917268 X. tropicalis

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g011617 X. tropicalis
ENSEMBL 10.0 trmt5 X. tropicalis
Xenbase 9.1 gene6969 X. tropicalis
JGI 8.0 Xetrov14035080m.g X. tropicalis
JGI 7.1 Xetro.H01605 X. tropicalis
ENSEMBL 4.1 ENSXETG00000014455 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_491000021 X. tropicalis
JGI 4.1 e_gw1.491.10.1 X. tropicalis
JGI 4.1 e_gw1.491.58.1 X. tropicalis
JGI 4.1 e_gw1.491.9.1 X. tropicalis
JGI 4.1 gw1.491.10.1 X. tropicalis
JGI 4.1 gw1.491.58.1 X. tropicalis
JGI 4.1 gw1.491.9.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4910012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910058 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4910005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4910021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4910022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4910009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_491000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_491000022 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_491000009 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.0 mRNA057688 X. tropicalis
ENSEMBL 10.0 ENSXETT00000109091 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120718 X. tropicalis
Xenbase 9.1 rna22467 X. tropicalis
JGI 8.0 Xetrov14035080m X. tropicalis
JGI 7.1 Xetro.H01605.3 X. tropicalis
JGI 7.1 Xetro.H01605.2 X. tropicalis
JGI 7.1 Xetro.H01605.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_491000021 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031631 X. tropicalis
JGI 4.1 e_gw1.491.10.1 X. tropicalis
JGI 4.1 e_gw1.491.58.1 X. tropicalis
JGI 4.1 e_gw1.491.9.1 X. tropicalis
JGI 4.1 gw1.491.10.1 X. tropicalis
JGI 4.1 gw1.491.58.1 X. tropicalis
JGI 4.1 gw1.491.9.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4910012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910058 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4910005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4910021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4910022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4910009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_491000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_491000022 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_491000009 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
THdA009n18 CU025189 X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
XM_002939476 X. tropicalis
XM_004917211 X. tropicalis
XM_031890757 X. tropicalis

ESTs (30)

Clone Accession 5'/3' Species Library Anatomy Stage
xtbs05A04 CN074502 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
CAAO5629 CX937722 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7618275 CX362888 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7578755 CX416739 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577697 CX423178 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576816 CX422393 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540070 CX460910 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538542 CX450626 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568450 CX456445 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564641 CX474785 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7671054 CX879066 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7529237 CX425960 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528024 CX424788 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA002f06 CR576408 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA009n18 CR564986 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas087n11 AL955073 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas009n11 AL630315 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu096b12 AL786876 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
CAAO5629 CX937721 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7578755 CX416738 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540070 CX460909 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7671054 CX879065 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7618275 DR897655 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7568450 CX456444 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538542 CX450625 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577697 CX423177 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576816 CX422392 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA009n18 CR564987 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA052o11 CR443658 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas087n11 BX751749 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12