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Summary Expression Phenotypes Gene Literature (1) GO Terms (24) Nucleotides (135) Proteins (67) Interactants (142) Wiki
XB-GENEPAGE-956282

Show:     All X. tropicalis X. laevis

Nucleotide sequences for atxn7 - All

RefSeq mRNAs(12)
Models - Gene (27)
Models - mRNA (34)
mRNAs (14)
ESTs (24)

RefSeq mRNAs (12)

Accession Version Protein Name Length Protein Species
NM_001113030 NM_001113030.1 ataxin-7 2957 bp NP_001106501 X. tropicalis
XM_012960531 XM_012960531.3 ataxin-7 isoform X1 7213 bp XP_012815985 X. tropicalis
XM_012960532 XM_012960532.3 ataxin-7 isoform X2 7013 bp XP_012815986 X. tropicalis
XM_012960534 XM_012960534.3 ataxin-7 isoform X4 6741 bp XP_012815988 X. tropicalis
XM_018092903 XM_018092903.2 ataxin-7 isoform X3 7188 bp XP_017948392 X. tropicalis
NM_001092500 NM_001092500.1 ataxin 7 L homeolog 3016 bp NP_001085969 X. laevis.L
XM_018256712 XM_018256712.2 ataxin 7 L homeolog isoform X1 3524 bp XP_018112201 X. laevis.L
XM_018256714 XM_018256714.2 ataxin 7 L homeolog isoform X2 3636 bp XP_018112203 X. laevis.L
XM_041589275 XM_041589275.1 XP_041445209.1 ataxin 7 L homeolog isoform X3 3276 bp XP_041445209 X. laevis.L
XM_018261498 XM_018261498.2 ataxin-7 isoform X1 3484 bp XP_018116987 X. laevis.S
XM_018261499 XM_018261499.2 ataxin-7 isoform X2 3537 bp XP_018116988 X. laevis.S
XM_041561792 XM_041561792.1 XP_041417726.1 ataxin-7 isoform X3 3268 bp XP_041417726 X. laevis.S

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g20106 X. laevis.L
NCBI 10.1 XBXL10_1g22361 X. laevis.S
NCBI 10.0 XBXT10g012271 X. tropicalis
ENSEMBL 10.0 mapk15 X. tropicalis
Xenbase 9.2 gene13459 X. laevis.S
Xenbase 9.2 gene16288 X. laevis.L
JGI 9.1 Xelaev18026022m.g X. laevis.S
JGI 9.1 Xelaev18024138m.g X. laevis.L
Xenbase 9.1 gene2941 X. tropicalis
ENSEMBL 9.1 atxn7 X. tropicalis
JGI 8.0 Xetrov14020761m.g X. tropicalis
JGI 7.2 Xelaev16046136m.g X. laevis.L
JGI 7.1 Xetro.D02471 X. tropicalis
JGI 6.0 XeXenL6RMv10008843m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000006538 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3690102 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3690101 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3690092 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3690003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_369000007 X. tropicalis
JGI 4.1 gw1.369.102.1 X. tropicalis
JGI 4.1 gw1.369.101.1 X. tropicalis
JGI 4.1 e_gw1.369.92.1 X. tropicalis
JGI 4.1 e_gw1.369.102.1 X. tropicalis
JGI 4.1 e_gw1.369.101.1 X. tropicalis
JGI 4.1 gw1.369.92.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3690007 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA37251 X. laevis.L
NCBI 10.1 XBmRNA41611 X. laevis.S
NCBI 10.0 mRNA060782 X. tropicalis
ENSEMBL 10.0 ENSXETT00000064176 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083440 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096063 X. tropicalis
ENSEMBL 10.0 ENSXETT00000014301 X. tropicalis
Xenbase 9.2 rna39165 X. laevis.S
Xenbase 9.2 rna47579 X. laevis.L
Xenbase 9.1 rna9634 X. tropicalis
JGI 9.1 Xelaev18026022m X. laevis.S
ENSEMBL 9.1 ENSXETT00000014301 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083440 X. tropicalis
ENSEMBL 9.1 ENSXETT00000064176 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096063 X. tropicalis
JGI 9.1 Xelaev18024138m X. laevis.L
JGI 8.0 Xetrov14020761m X. tropicalis
JGI 7.2 Xelaev16046136m X. laevis.L
JGI 7.1 Xetro.D02471.2 X. tropicalis
JGI 7.1 Xetro.D02471.1 X. tropicalis
JGI 6.0 XeXenL6RMv10008843m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_369000007 X. tropicalis
JGI 4.1 e_gw1.369.102.1 X. tropicalis
JGI 4.1 e_gw1.369.92.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000014301 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3690007 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3690003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3690092 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3690101 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3690102 X. tropicalis
JGI 4.1 e_gw1.369.101.1 X. tropicalis
JGI 4.1 gw1.369.101.1 X. tropicalis
JGI 4.1 gw1.369.102.1 X. tropicalis
JGI 4.1 gw1.369.92.1 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
IMAGE:7691728 BC154704 X. tropicalis NIH_XGC_tropTe4 testis frog
NM_001113030 X. tropicalis
XM_012960531 X. tropicalis
XM_012960532 X. tropicalis
XM_012960534 X. tropicalis
XM_018092903 X. tropicalis
IMAGE:5514405 BC073622 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001092500 X. laevis.L
XM_018256712 X. laevis.L
XM_018256714 X. laevis.L
XM_041589275 X. laevis.L
XM_018261498 X. laevis.S
XM_018261499 X. laevis.S
XM_041561792 X. laevis.S

ESTs (24)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7626582 CX380422 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7693550 CX920881 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7658395 CX837307 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7690798 CX915784 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO9267 CX957490 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7691728 CX917353 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692311 CX918474 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas019g15 AL631493 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAN11480 CX927357 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692311 CX918473 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693550 CX920880 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11480 CX927356 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO9267 CX957489 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7626582 CX380421 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7658395 CX837306 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7691728 CX917352 3' X. tropicalis NIH_XGC_tropTe4 testis frog
XL076f21 BJ063460 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGp998A0914204 BX849063 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xlk53f11ex DC033522 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3580140 BG160301 5' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:5514405 CF286939 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6633297 BU907978 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
rxlk53f11ex DC000729 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3580140 BG021254 3' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30