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Summary Expression Phenotypes Gene Literature (0) GO Terms (6) Nucleotides (100) Proteins (36) Interactants (2) Wiki
XB-GENEPAGE-955001

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for smpdl3a - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (14)
Models - mRNA (20)
mRNAs (4)
ESTs (15)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001030447 NM_001030447.2 acid sphingomyelinase-like phosphodiesterase 3a precursor 1549 bp NP_001025618 X. tropicalis
XM_012963075 XM_012963075.3 acid sphingomyelinase-like phosphodiesterase 3a isoform X1 2286 bp XP_012818529 X. tropicalis

Models - Gene (14)

Source Version Model Species
NCBI 10.0 XBXT10g017559 X. tropicalis
ENSEMBL 10.0 smpdl3a X. tropicalis
Xenbase 9.1 gene6117 X. tropicalis
ENSEMBL 9.1 smpdl3a X. tropicalis
JGI 7.1 Xetro.E01068 X. tropicalis
ENSEMBL 4.1 ENSXETG00000023296 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_274000044 X. tropicalis
JGI 4.1 e_gw1.274.142.1 X. tropicalis
JGI 4.1 e_gw1.274.20.1 X. tropicalis
JGI 4.1 e_gw1.274.23.1 X. tropicalis
JGI 4.1 gw1.274.142.1 X. tropicalis
JGI 4.1 gw1.274.20.1 X. tropicalis
JGI 4.1 gw1.274.23.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_274000010 X. tropicalis

mRNAs based on gene models(20)

Source Version Model Species
NCBI 10.0 mRNA086684 X. tropicalis
ENSEMBL 10.0 ENSXETT00000050330 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120525 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093650 X. tropicalis
ENSEMBL 10.0 ENSXETT00000050332 X. tropicalis
Xenbase 9.1 rna19757 X. tropicalis
ENSEMBL 9.1 ENSXETT00000050330 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093650 X. tropicalis
JGI 7.1 Xetro.E01068.2 X. tropicalis
JGI 7.1 Xetro.E01068.3 X. tropicalis
JGI 7.1 Xetro.E01068.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_274000044 X. tropicalis
ENSEMBL 4.1 ENSXETT00000050330 X. tropicalis
JGI 4.1 e_gw1.274.142.1 X. tropicalis
JGI 4.1 e_gw1.274.20.1 X. tropicalis
JGI 4.1 e_gw1.274.23.1 X. tropicalis
JGI 4.1 gw1.274.142.1 X. tropicalis
JGI 4.1 gw1.274.20.1 X. tropicalis
JGI 4.1 gw1.274.23.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_274000010 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
NM_001030447 X. tropicalis
IMAGE:7024261 BC091078 X. tropicalis
XM_012963075 X. tropicalis
CX939878 X. tropicalis

ESTs (15)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8909940 EL805199 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7632751 CX373744 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7600623 CX345580 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7532459 CX433422 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7703430 CX939878 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7646239 CX803560 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
TTbA067m07 CR420128 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA068f20 BX716250 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8909940 EL805200 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7646239 CX803559 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7703430 CX939877 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7532459 CX433421 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7632751 CX373743 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA067m07 CR420129 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA068f20 BX716251 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40