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Summary Expression Phenotypes Gene Literature (4) GO Terms (26) Nucleotides (167) Proteins (55) Interactants (22) Wiki
XB-GENEPAGE-954398

Show:     All X. tropicalis X. laevis

Nucleotide sequences for vps36 - All

RefSeq mRNAs(3)
Models - Gene (31)
Models - mRNA (43)
mRNAs (7)
ESTs (64)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001016469 NM_001016469.2 vacuolar protein-sorting-associated protein 36 1759 bp NP_001016469 X. tropicalis
NM_001093423 NM_001093423.1 vacuolar protein-sorting-associated protein 36 2181 bp NP_001086892 X. laevis.L
XM_041581024 XM_041581024.1 XP_041436958.1 vacuolar protein-sorting-associated protein 36 isoform X1 2163 bp XP_041436958 X. laevis.L

Models - Gene (31)

Source Version Model Species
NCBI 10.1 XBXL10_1g8339 X. laevis.L
NCBI 10.0 XBXT10g002229 X. tropicalis
ENSEMBL 10.0 vps36 X. tropicalis
Xenbase 9.2 gene47487 X. laevis.L
JGI 9.1 Xelaev18013675m.g X. laevis.L
Xenbase 9.1 gene7973 X. tropicalis
ENSEMBL 9.1 vps36 X. tropicalis
JGI 8.0 Xetrov14010493m.g X. tropicalis
JGI 7.2 Xelaev16025504m.g X. laevis.L
JGI 7.1 Xetro.B01610 X. tropicalis
JGI 6.0 XeXenL6RMv10024704m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000020707 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2330026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2330027 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_233000026 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_233000005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_233000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_233000027 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_233000007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2330007 X. tropicalis
JGI 4.1 e_gw1.233.108.1 X. tropicalis
JGI 4.1 e_gw1.233.7.1 X. tropicalis
JGI 4.1 e_gw1.233.87.1 X. tropicalis
JGI 4.1 gw1.233.108.1 X. tropicalis
JGI 4.1 gw1.233.7.1 X. tropicalis
JGI 4.1 gw1.233.87.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2330021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2330007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2330087 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2330108 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2330009 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
NCBI 10.1 XBmRNA15745 X. laevis.L
ENSEMBL 10.0 ENSXETT00000086406 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092620 X. tropicalis
NCBI 10.0 mRNA011308 X. tropicalis
Xenbase 9.2 rna92646 X. laevis.L
ENSEMBL 9.1 ENSXETT00000091857 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092620 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095862 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098668 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100058 X. tropicalis
ENSEMBL 9.1 ENSXETT00000105088 X. tropicalis
Xenbase 9.1 rna25711 X. tropicalis
JGI 9.1 Xelaev18013675m X. laevis.L
ENSEMBL 9.1 ENSXETT00000044747 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086406 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087915 X. tropicalis
JGI 8.0 Xetrov14010493m X. tropicalis
JGI 7.2 Xelaev16025504m X. laevis.L
JGI 7.1 Xetro.B01610.1 X. tropicalis
JGI 7.1 Xetro.B01610.2 X. tropicalis
JGI 7.1 Xetro.B01610.3 X. tropicalis
JGI 7.1 Xetro.B01610.4 X. tropicalis
JGI 6.0 XeXenL6RMv10024704m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_233000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_233000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_233000027 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_233000007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_233000005 X. tropicalis
JGI 4.1 gw1.233.108.1 X. tropicalis
JGI 4.1 gw1.233.7.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2330027 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2330026 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2330009 X. tropicalis
JGI 4.1 e_gw1.233.108.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000044747 X. tropicalis
JGI 4.1 e_gw1.233.87.1 X. tropicalis
JGI 4.1 e_gw1.233.7.1 X. tropicalis
JGI 4.1 gw1.233.87.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2330007 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2330021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2330007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2330087 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2330108 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7856211 BC122006 X. tropicalis
IMAGE:7706483 BC157773 X. tropicalis NIH_XGC_tropTe5 testis frog
TEgg070a06 CR760922 X. tropicalis
NM_001016469 X. tropicalis
IMAGE:6641897 BC077615 X. laevis.L
NM_001093423 X. laevis.L
XM_041581024 X. laevis.L

ESTs (64)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8871805 EL714321 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7555729 CX502790 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8957723 EL656186 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8957842 EL656708 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8890192 EL850093 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TNeu007o22 AL642643 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr19C08 CN101430 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8925462 EL671884 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8947474 EG655204 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
TGas033o16 AL648831 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas133o20 AL972939 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8949247 EG655152 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7852001 DT391813 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7804343 DR839885 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7733784 DN018578 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
CAAO12548 CX963557 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7706483 CX958164 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7664509 CX848724 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7663800 CX848434 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7663693 CX847372 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTpA074l20 BX737003 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA043l21 CR576929 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA004o05 CR408189 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7552476 CX495382 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555729 CX502789 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8871805 EL714320 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7552476 DR889237 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA004o05 CR408190 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA043l21 CR576930 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA074l20 BX737004 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7663693 CX847371 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7663800 CX848433 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7664509 CX848723 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7706483 CX958163 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO12548 CX963556 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7733784 DN018577 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7804343 DR839884 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7852001 DT391812 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8925462 EL671883 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
xthr19C08 CN101429 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8890192 EL850094 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XL180d18 BJ617311 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8538852 EB470733 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
XL176a05 BJ616187 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl235e09 DC104248 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL166b21 BJ613995 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl226p08 DC101743 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL033h18 BJ042986 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
xl287m12 DC119691 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:5536992 BQ731282 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL208d03 BJ624348 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl247a01 DC107860 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7979332 DR715318 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xl338a02 DC134311 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk112e11ex DC039523 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk115i04ex DC040566 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3549665 BG578510 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGp998D188640 BX852393 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
AW764472 AW764472 5' X. laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24
XL148f03 BJ098879 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3549665 BG555264 3' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
XL208d03 BJ640901 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL033h18 BJ056936 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL180d18 BJ633802 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5