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Summary Expression Phenotypes Gene Literature (0) GO Terms (14) Nucleotides (84) Proteins (29) Interactants (21) Wiki
XB-GENEPAGE-953699

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ttf1 - All

RefSeq mRNAs(4)
Models - Gene (8)
Models - mRNA (15)
mRNAs (4)
ESTs (37)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_031890890 XM_031890890.1 XP_031746750.1 transcription termination factor 1 isoform X1 5667 bp XP_031746750 X. tropicalis
XM_031890891 XM_031890891.1 XP_031746751.1 transcription termination factor 1 isoform X1 5654 bp XP_031746751 X. tropicalis
XM_031890892 XM_031890892.1 XP_031746752.1 transcription termination factor 1 isoform X1 5771 bp XP_031746752 X. tropicalis
XM_031890893 XM_031890893.1 XP_031746753.1 transcription termination factor 1 isoform X2 5652 bp XP_031746753 X. tropicalis

Models - Gene (8)

Source Version Model Species
NCBI 10.0 XBXT10g003612 X. tropicalis
ENSEMBL 10.0 ttf1 X. tropicalis
Xenbase 9.1 gene4881 X. tropicalis
ENSEMBL 9.1 ttf1 X. tropicalis
JGI 7.1 Xetro.H00125 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1910017 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1910016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_191000018 X. tropicalis

mRNAs based on gene models(15)

Source Version Model Species
NCBI 10.0 mRNA018238 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092806 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104308 X. tropicalis
ENSEMBL 10.0 ENSXETT00000114880 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069248 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069248 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104308 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092806 X. tropicalis
Xenbase 9.1 rna15898 X. tropicalis
JGI 7.1 Xetro.H00125.3 X. tropicalis
JGI 7.1 Xetro.H00125.1 X. tropicalis
JGI 7.1 Xetro.H00125.2 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1910017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_191000018 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1910016 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_031890890 X. tropicalis
XM_031890891 X. tropicalis
XM_031890892 X. tropicalis
XM_031890893 X. tropicalis

ESTs (37)

Clone Accession 5'/3' Species Library Anatomy Stage
THdA052i12 CR587012 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA026m19 CR573639 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu093o06 AL781171 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu096i24 AL786670 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8889908 EL849491 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7524468 CX439318 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526685 CX444016 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7518415 CX750033 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7569550 CX453364 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569550 CX453363 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu093o06 BX695836 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7518415 CX750032 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:8889908 EL849492 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
THdA052i12 CR587013 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
XL471o15ex BP693889 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk137d20ex DC047592 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk77f02ex DC060093 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:6874648 CB199615 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:3378789 BF048635 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6631943 BU906876 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xl301l02 DC123578 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl319f05 DC128764 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL028k08 BJ034461 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL417n05ex BP674807 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL439g12ex BP681996 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL439i13ex BP682039 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7296784 CO387568 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:6874648 CB563523 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
rxl230c18 DC068626 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl301l02 DC088693 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl319f05 DC093044 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl331n05 DC096636 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL170a11 BJ631624 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL188g04 BJ635839 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189g04 BJ636120 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL190g04 BJ636377 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL471o15ex BP727967 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5