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Summary Expression Phenotypes Gene Literature (0) GO Terms (6) Nucleotides (100) Proteins (57) Interactants (2) Wiki
XB-GENEPAGE-953401

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for rpusd1 - All

RefSeq mRNAs(2)
Models - Gene (30)
Models - mRNA (36)
mRNAs (9)
ESTs (4)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
XM_041575827 XM_041575827.1 XP_041431761.1 RNA pseudouridylate synthase domain-containing protein 1 isoform X2 2453 bp XP_041431761 X. laevis.L
XM_041575826 XM_041575826.1 XP_041431760.1 uncharacterized protein rpusd1.L isoform X1 2822 bp XP_041431760 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g004783 X. tropicalis
NCBI 10.1 XBXL10_1g41407 X. laevis.L
ENSEMBL 10.0 rpusd1 X. tropicalis
ENSEMBL 10.0 rpusd1 X. tropicalis
JGI 9.1 Xelaev18045541m.g X. laevis.L
Xenbase 9.1 gene754 X. tropicalis
Xenbase 9.2 gene9685 X. laevis.L
ENSEMBL 9.1 c4a X. tropicalis
ENSEMBL 9.1 rpusd1 X. tropicalis
JGI 7.1 Xetro.I01551 X. tropicalis
JGI 6.0 XeXenL6RMv10001645m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000007184 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000070 X. tropicalis
JGI 4.1 e_gw1.174.177.1 X. tropicalis
JGI 4.1 e_gw1.174.23.1 X. tropicalis
JGI 4.1 e_gw1.174.286.1 X. tropicalis
JGI 4.1 gw1.174.177.1 X. tropicalis
JGI 4.1 gw1.174.23.1 X. tropicalis
JGI 4.1 gw1.174.286.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740052 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740177 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740286 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1740016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740069 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740070 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1740027 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_174000016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000071 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000028 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.0 mRNA023710 X. tropicalis
NCBI 10.1 XBmRNA78139 X. laevis.L
ENSEMBL 10.0 ENSXETT00000091339 X. tropicalis
ENSEMBL 10.0 ENSXETT00000077444 X. tropicalis
ENSEMBL 10.0 ENSXETT00000109211 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120495 X. tropicalis
ENSEMBL 10.0 ENSXETT00000015611 X. tropicalis
JGI 9.1 Xelaev18045541m X. laevis.L
Xenbase 9.1 rna2414 X. tropicalis
Xenbase 9.2 rna28179 X. laevis.L
ENSEMBL 9.1 ENSXETT00000091339 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077444 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095991 X. tropicalis
ENSEMBL 9.1 ENSXETT00000015611 X. tropicalis
JGI 7.1 Xetro.I01551.1 X. tropicalis
JGI 6.0 XeXenL6RMv10001645m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_174000070 X. tropicalis
ENSEMBL 4.1 ENSXETT00000015613 X. tropicalis
ENSEMBL 4.1 ENSXETT00000015611 X. tropicalis
JGI 4.1 e_gw1.174.177.1 X. tropicalis
JGI 4.1 e_gw1.174.23.1 X. tropicalis
JGI 4.1 e_gw1.174.286.1 X. tropicalis
JGI 4.1 gw1.174.177.1 X. tropicalis
JGI 4.1 gw1.174.23.1 X. tropicalis
JGI 4.1 gw1.174.286.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740052 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740177 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740286 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1740016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740069 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740070 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1740027 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_174000016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000071 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000028 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
TNeu065l04 CU075703 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_002935848 X. tropicalis
XM_012970821 X. tropicalis
XM_012970820 X. tropicalis
XM_012970819 X. tropicalis
XM_031892877 X. tropicalis
XM_031892876 X. tropicalis
XM_041575827 X. laevis.L
XM_041575826 X. laevis.L

ESTs (4)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8949964 EG655440 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
TNeu065l04 AL784422 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas068e06 AL681095 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu065l04 BX686156 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21