Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (3) Nucleotides (64) Proteins (39) Interactants (1) Wiki
XB-GENEPAGE-952328

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for col21a1 - All

RefSeq mRNAs(3)
Models - Gene (27)
Models - mRNA (27)
mRNAs (4)
ESTs (1)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
XM_002934864 XM_002934864. collagen alpha-1(XXI) chain 3569 bp XP_002934910 X. tropicalis
NM_001094389 NM_001094389.1 collagen alpha-1(XXI) chain precursor 4221 bp NP_001087858 X. laevis.L
XM_018265550 XM_018265550.2 collagen alpha-1(XXI) chain 3542 bp XP_018121039 X. laevis.S

Models - Gene (27)

Source Version Model Species
NCBI 10.0 XBXT10g018714 X. tropicalis
NCBI 10.1 XBXL10_1g23739 X. laevis.L
NCBI 10.1 XBXL10_1g25632 X. laevis.S
JGI 9.1 Xelaev18027358m.g X. laevis.L
JGI 9.1 Xelaev18029492m.g X. laevis.S
Xenbase 9.1 gene30075 X. tropicalis
Xenbase 9.2 gene15974 X. laevis.L
Xenbase 9.2 gene37626 X. laevis.S
JGI 8.0 Xetrov14022726m.g X. tropicalis
JGI 7.1 Xetro.E00455 X. tropicalis
JGI 7.2 Xelaev16048362m.g X. laevis.L
JGI 6.0 XeXenL6RMv10001619m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000022756 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_114000011 X. tropicalis
JGI 4.1 gw1.114.111.1 X. tropicalis
JGI 4.1 gw1.114.135.1 X. tropicalis
JGI 4.1 gw1.114.17.1 X. tropicalis
JGI 4.1 gw1.114.19.1 X. tropicalis
JGI 4.1 gw1.114.23.1 X. tropicalis
JGI 4.1 gw1.114.25.1 X. tropicalis
JGI 4.1 e_gw1.114.111.1 X. tropicalis
JGI 4.1 e_gw1.114.135.1 X. tropicalis
JGI 4.1 e_gw1.114.17.1 X. tropicalis
JGI 4.1 e_gw1.114.19.1 X. tropicalis
JGI 4.1 e_gw1.114.23.1 X. tropicalis
JGI 4.1 e_gw1.114.25.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_114000005 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.0 mRNA092434 X. tropicalis
NCBI 10.1 XBmRNA44348 X. laevis.L
NCBI 10.1 XBmRNA47916 X. laevis.S
JGI 9.1 Xelaev18027358m X. laevis.L
JGI 9.1 Xelaev18029492m X. laevis.S
Xenbase 9.1 rna57653 X. tropicalis
Xenbase 9.2 rna46695 X. laevis.L
Xenbase 9.2 rna78402 X. laevis.S
JGI 8.0 Xetrov14022726m X. tropicalis
JGI 7.1 Xetro.E00455.1 X. tropicalis
JGI 7.2 Xelaev16048362m X. laevis.L
JGI 6.0 XeXenL6RMv10001619m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_114000011 X. tropicalis
ENSEMBL 4.1 ENSXETT00000049244 X. tropicalis
JGI 4.1 e_gw1.114.111.1 X. tropicalis
JGI 4.1 e_gw1.114.135.1 X. tropicalis
JGI 4.1 e_gw1.114.17.1 X. tropicalis
JGI 4.1 e_gw1.114.19.1 X. tropicalis
JGI 4.1 e_gw1.114.23.1 X. tropicalis
JGI 4.1 e_gw1.114.25.1 X. tropicalis
JGI 4.1 gw1.114.111.1 X. tropicalis
JGI 4.1 gw1.114.135.1 X. tropicalis
JGI 4.1 gw1.114.17.1 X. tropicalis
JGI 4.1 gw1.114.19.1 X. tropicalis
JGI 4.1 gw1.114.23.1 X. tropicalis
JGI 4.1 gw1.114.25.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_114000005 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_002934864 X. tropicalis
IMAGE:7007696 BC082384 X. laevis.L
NM_001094389 X. laevis.L
XM_018265550 X. laevis.S

ESTs (1)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8864259 EL700606 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66