Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (1) Nucleotides (180) Proteins (56) Interactants (56) Wiki
XB-GENEPAGE-949625

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for traf7 - Xenopus tropicalis

RefSeq mRNAs(3)
Models - Gene (15)
Models - mRNA (30)
mRNAs (4)
ESTs (47)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001142030 NM_001142030.1 E3 ubiquitin-protein ligase TRAF7 3567 bp NP_001135502 X. tropicalis
XM_012970173 XM_012970173.3 E3 ubiquitin-protein ligase TRAF7 isoform X1 3548 bp XP_012825627 X. tropicalis
XM_012970174 XM_012970174.3 E3 ubiquitin-protein ligase TRAF7 isoform X1 3473 bp XP_012825628 X. tropicalis

Models - Gene (15)

Source Version Model Species
NCBI 10.0 XBXT10g010733 X. tropicalis
ENSEMBL 10.0 traf7 X. tropicalis
Xenbase 9.1 gene4717 X. tropicalis
ENSEMBL 9.1 traf7 X. tropicalis
JGI 8.0 Xetrov14038712m.g X. tropicalis
JGI 7.1 Xetro.I01489 X. tropicalis
ENSEMBL 4.1 ENSXETG00000015971 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_27000145 X. tropicalis
JGI 4.1 e_gw1.27.269.1 X. tropicalis
JGI 4.1 e_gw1.27.415.1 X. tropicalis
JGI 4.1 e_gw1.27.446.1 X. tropicalis
JGI 4.1 gw1.27.269.1 X. tropicalis
JGI 4.1 gw1.27.415.1 X. tropicalis
JGI 4.1 gw1.27.446.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_27000032 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA053170 X. tropicalis
ENSEMBL 10.0 ENSXETT00000060869 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083804 X. tropicalis
ENSEMBL 10.0 ENSXETT00000034856 X. tropicalis
ENSEMBL 10.0 ENSXETT00000073991 X. tropicalis
Xenbase 9.1 rna15381 X. tropicalis
ENSEMBL 9.1 ENSXETT00000060869 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083804 X. tropicalis
ENSEMBL 9.1 ENSXETT00000034856 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099611 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094114 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088911 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068382 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072842 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093060 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073991 X. tropicalis
JGI 8.0 Xetrov14038712m X. tropicalis
JGI 7.1 Xetro.I01489.3 X. tropicalis
JGI 7.1 Xetro.I01489.4 X. tropicalis
JGI 7.1 Xetro.I01489.2 X. tropicalis
JGI 7.1 Xetro.I01489.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_27000145 X. tropicalis
ENSEMBL 4.1 ENSXETT00000034856 X. tropicalis
JGI 4.1 e_gw1.27.269.1 X. tropicalis
JGI 4.1 e_gw1.27.415.1 X. tropicalis
JGI 4.1 e_gw1.27.446.1 X. tropicalis
JGI 4.1 gw1.27.269.1 X. tropicalis
JGI 4.1 gw1.27.415.1 X. tropicalis
JGI 4.1 gw1.27.446.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_27000032 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
IMAGE:7570190 BC167907 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
NM_001142030 X. tropicalis
XM_012970174 X. tropicalis
XM_012970173 X. tropicalis

ESTs (47)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8907872 EL801714 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8958196 EL663429 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8958864 EL662672 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8932918 EL643659 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
st69k03 DC183840 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st68k03 DC183599 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st67k03 DC183347 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st66k03 DC183093 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st65k03 DC182830 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st111j08 DC194782 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st110j08 DC194530 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8950783 EG652988 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7604196 CX395827 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7570190 CX454809 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7805377 DR841105 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7739546 DN029334 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7692828 CX919456 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690768 CX915917 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7662347 CX844525 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7517019 CX747859 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7519005 CX478600 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7587919 CX314082 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas034o22 AL654165 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas027p04 AL652631 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas032f06 AL648858 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu095l18 AL805818 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu069f07 AL785777 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8907872 EL801715 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8932918 EL643658 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
rst111j08 DC164146 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst110j08 DC163888 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst67k03 DC153140 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst66k03 DC152868 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst69k03 DC153653 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst65k03 DC152597 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst68k03 DC153401 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7692828 CX919455 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7662347 CX844524 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7805377 DR841104 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7739546 DN029333 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7690768 CX915916 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7517019 CX747858 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7519005 CX478599 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570190 CX454808 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7604196 CX395826 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7587919 CX314081 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu095l18 BX693907 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21