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Summary Expression Phenotypes Gene Literature (0) GO Terms (15) Nucleotides (87) Proteins (53) Interactants (15) Wiki
XB-GENEPAGE-948742

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sncaip - All

RefSeq mRNAs(9)
Models - Gene (23)
Models - mRNA (30)
mRNAs (10)
ESTs (8)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
NM_001005712 NM_001005712.1 synphilin-1 3384 bp NP_001005712 X. tropicalis
XM_012959362 XM_012959362.3 synphilin-1 isoform X1 4679 bp XP_012814816 X. tropicalis
XM_012959369 XM_012959369.3 synphilin-1 isoform X1 4720 bp XP_012814823 X. tropicalis
XM_031897761 XM_031897761.1 XP_031753621.1 synphilin-1 isoform X1 4717 bp XP_031753621 X. tropicalis
XM_018244288 XM_018244288.2 synphilin-1 isoform X1 3474 bp XP_018099777 X. laevis.S
XM_018244289 XM_018244289.2 synphilin-1 isoform X2 3033 bp XP_018099778 X. laevis.S
XM_018264212 XM_018264212.2 synphilin-1 isoform X1 3496 bp XP_018119701 X. laevis.L
XM_018264214 XM_018264214.2 synphilin-1 isoform X1 3432 bp XP_018119703 X. laevis.L
XM_018264219 XM_018264219.2 synphilin-1 isoform X2 3418 bp XP_018119708 X. laevis.L

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g5479 X. laevis.S
NCBI 10.1 XBXL10_1g2946 X. laevis.L
NCBI 10.0 XBXT10g019760 X. tropicalis
ENSEMBL 10.0 sncaip X. tropicalis
Xenbase 9.2 gene20183 X. laevis.S
Xenbase 9.2 gene6975 X. laevis.L
JGI 9.1 Xelaev18010747m.g X. laevis.S
JGI 9.1 Xelaev18007967m.g X. laevis.L
Xenbase 9.1 gene22404 X. tropicalis
ENSEMBL 9.1 sncaip X. tropicalis
JGI 7.1 Xetro.A00560 X. tropicalis
JGI 6.0 XeXenL6RMv10016220m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000027392 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_7000083 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_7000021 X. tropicalis
JGI 4.1 gw1.7.213.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_7000082 X. tropicalis
JGI 4.1 gw1.7.136.1 X. tropicalis
JGI 4.1 e_gw1.7.213.1 X. tropicalis
JGI 4.1 e_gw1.7.191.1 X. tropicalis
JGI 4.1 e_gw1.7.136.1 X. tropicalis
JGI 4.1 gw1.7.191.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_7000084 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.1 XBmRNA10225 X. laevis.S
NCBI 10.1 XBmRNA5265 X. laevis.L
NCBI 10.0 mRNA097566 X. tropicalis
ENSEMBL 10.0 ENSXETT00000057151 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094864 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102695 X. tropicalis
Xenbase 9.2 rna20367 X. laevis.L
Xenbase 9.2 rna58899 X. laevis.S
JGI 9.1 Xelaev18010747m X. laevis.S
ENSEMBL 9.1 ENSXETT00000057151 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087508 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102695 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094864 X. tropicalis
JGI 9.1 Xelaev18007967m X. laevis.L
Xenbase 9.1 rna45409 X. tropicalis
JGI 7.1 Xetro.A00560.1 X. tropicalis
JGI 7.1 Xetro.A00560.3 X. tropicalis
JGI 7.1 Xetro.A00560.2 X. tropicalis
JGI 6.0 XeXenL6RMv10016220m X. laevis.S
JGI 4.1 gw1.7.136.1 X. tropicalis
JGI 4.1 e_gw1.7.191.1 X. tropicalis
JGI 4.1 e_gw1.7.213.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000057151 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_7000021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_7000082 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_7000083 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_7000084 X. tropicalis
JGI 4.1 e_gw1.7.136.1 X. tropicalis
JGI 4.1 gw1.7.191.1 X. tropicalis
JGI 4.1 gw1.7.213.1 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:7003110 BC075299 X. tropicalis NICHD_XGC_Swb1 whole organism frog
NM_001005712 X. tropicalis
XM_012959362 X. tropicalis
XM_012959369 X. tropicalis
XM_031897761 X. tropicalis
XM_018244288 X. laevis.S
XM_018244289 X. laevis.S
XM_018264212 X. laevis.L
XM_018264214 X. laevis.L
XM_018264219 X. laevis.L

ESTs (8)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7003110 CF374297 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
st65a21 DC182691 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7600320 CX345189 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7624294 CX401934 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7003110 CF374296 3' X. tropicalis NICHD_XGC_Swb1 whole organism frog
rst65a21 DC152450 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7600320 CX345188 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XL050c04 BJ055672 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15