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Summary Expression Phenotypes Gene Literature (2) GO Terms (14) Nucleotides (246) Proteins (62) Interactants (224) Wiki
XB-GENEPAGE-948301

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cpsf4 - All

RefSeq mRNAs(5)
Models - Gene (38)
Models - mRNA (44)
mRNAs (8)
ESTs (105)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001007932 NM_001007932.1 cleavage and polyadenylation specificity factor subunit 4 1518 bp NP_001007933 X. tropicalis
XM_012970321 XM_012970321.2 cleavage and polyadenylation specificity factor subunit 4 isoform X1 1260 bp XP_012825775 X. tropicalis
XM_012970322 XM_012970322.3 cleavage and polyadenylation specificity factor subunit 4 isoform X2 1290 bp XP_012825776 X. tropicalis
NM_001092868 NM_001092868.1 cleavage and polyadenylation specificity factor subunit 4 1262 bp NP_001086337 X. laevis.S
XM_018236256 XM_018236256.2 cleavage and polyadenylation specificity factor subunit 4 1173 bp XP_018091745 X. laevis.L

Models - Gene (38)

Source Version Model Species
NCBI 10.1 XBXL10_1g41000 X. laevis.L
NCBI 10.1 XBXL10_1g43738 X. laevis.S
NCBI 10.0 XBXT10g009112 X. tropicalis
ENSEMBL 10.0 cpsf4 X. tropicalis
Xenbase 9.2 gene3451 X. laevis.L
Xenbase 9.2 gene15328 X. laevis.S
JGI 9.1 Xelaev18045064m.g X. laevis.L
JGI 9.1 Xelaev18047439m.g X. laevis.S
Xenbase 9.1 gene488 X. tropicalis
ENSEMBL 9.1 cpsf4 X. tropicalis
JGI 8.0 Xetrov14037984m.g X. tropicalis
JGI 7.1 Xetro.I00758 X. tropicalis
JGI 6.0 XeXenL6RMv10012088m.g X. laevis.S
JGI 6.0 XeXenL6RMv10041808m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000009892 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_20015 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_2000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000040 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_2000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000042 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_2000016 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_2000009 X. tropicalis
JGI 4.1 e_gw1.2.485.1 X. tropicalis
JGI 4.1 e_gw1.2.489.1 X. tropicalis
JGI 4.1 e_gw1.2.543.1 X. tropicalis
JGI 4.1 gw1.2.485.1 X. tropicalis
JGI 4.1 gw1.2.489.1 X. tropicalis
JGI 4.1 gw1.2.543.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_20022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20485 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20489 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20543 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_20009 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_20010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20040 X. tropicalis

mRNAs based on gene models(44)

Source Version Model Species
NCBI 10.1 XBmRNA82335 X. laevis.S
NCBI 10.1 XBmRNA77344 X. laevis.L
ENSEMBL 10.0 ENSXETT00000110681 X. tropicalis
ENSEMBL 10.0 ENSXETT00000101706 X. tropicalis
NCBI 10.0 mRNA045137 X. tropicalis
ENSEMBL 10.0 ENSXETT00000021783 X. tropicalis
Xenbase 9.2 rna44737 X. laevis.S
Xenbase 9.2 rna10034 X. laevis.L
ENSEMBL 9.1 ENSXETT00000077448 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101706 X. tropicalis
ENSEMBL 9.1 ENSXETT00000021783 X. tropicalis
Xenbase 9.1 rna1522 X. tropicalis
JGI 9.1 Xelaev18047439m X. laevis.S
JGI 9.1 Xelaev18045064m X. laevis.L
JGI 8.0 Xetrov14037984m X. tropicalis
JGI 7.1 Xetro.I00758.1 X. tropicalis
JGI 7.1 Xetro.I00758.2 X. tropicalis
JGI 7.1 Xetro.I00758.3 X. tropicalis
JGI 6.0 XeXenL6RMv10012088m X. laevis.S
JGI 6.0 XeXenL6RMv10041808m X. laevis.S
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_2000012 X. tropicalis
JGI 4.1 e_gw1.2.485.1 X. tropicalis
JGI 4.1 gw1.2.489.1 X. tropicalis
JGI 4.1 gw1.2.543.1 X. tropicalis
JGI 4.1 gw1.2.485.1 X. tropicalis
JGI 4.1 e_gw1.2.489.1 X. tropicalis
JGI 4.1 e_gw1.2.543.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021783 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_20009 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_20010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20040 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_20015 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_20022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20485 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20489 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20543 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_2000009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_2000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000040 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000042 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_2000016 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7016767 BC080440 X. tropicalis NICHD_XGC_Swb1 whole organism frog
TGas053l04 CR761660 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001007932 X. tropicalis
XM_012970321 X. tropicalis
XM_012970322 X. tropicalis
IMAGE:7008442 BC075128 X. laevis.S
NM_001092868 X. laevis.S
XM_018236256 X. laevis.L

ESTs (105)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7610960 CX377753 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO5005 CX936597 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7513910 CX743450 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TNeu021p11 AL636268 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XZT4674 CX400799 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr26M24 CN104748 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA071d03 CR445622 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6991897 CF240046 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8854524 EL816736 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7529265 CX425880 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7016767 CF524602 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7575116 CX429959 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA050f19 CR580389 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7521113 CX468954 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA009g20 CR413072 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7564165 CX474144 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas018d04 AL629627 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7552313 CX494268 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas013m16 AL632252 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7552711 CX495032 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas055c20 AL678104 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7546260 CX499683 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas053l04 AL678292 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu061j08 AL674105 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085h14 AL793136 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu102m16 AL803206 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas086k13 AL960434 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8935206 EL636902 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
THdA022g12 CR587288 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7846352 DT529643 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7798807 DN059321 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
TTbA009g21 CR411415 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA039i05 CR433735 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8888075 EL845966 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xthr27M23 CN105177 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7846352 DT529642 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7798807 DN059320 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
TNeu085h14 BX691057 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu102m16 BX694394 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA009g21 CR411416 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA009g20 CR413073 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA039i05 CR433736 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA050f19 CR580390 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA022g12 CR587289 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA025h16 BX740442 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XZT4674 CX400798 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610960 DR895684 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO5005 CX936596 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:6991897 CF240047 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas055c20 BX745787 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas053l04 BX748066 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas086k13 BX750344 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8888075 EL845967 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7513910 CX743449 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
xthr27M23 CN105176 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr26M24 CN104747 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8854524 EL816737 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7575116 CX429958 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521113 CX468953 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564165 CX474143 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552313 CX494267 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552711 CX495031 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546260 CX499682 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546672 CX500545 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu061j08 BX684654 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8935206 EL636901 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
XL218g07 BJ627528 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
AW872201 AW872201 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0087B01 AW639784 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0132B07 AW643731 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0164C11 AW646476 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3377534 BE189871 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6322612 CA971279 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6323966 CA972284 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6867488 CA981120 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6868168 CA981635 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6867239 CA982684 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6633427 BU908089 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998F1914204 BX843740 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
xl263f03 DC112746 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL189a03 BJ619380 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL199h10 BJ622016 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL218c09 BJ627461 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL444j02ex BP683968 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL447d18ex BP684852 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL475o21ex BP694908 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL493l18ex BP708175 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk107n11ex DC038144 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk8p13ex DC062216 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8535239 EB471942 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
rxlk8p13ex DC028689 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk107n11ex DC005213 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL494l18ex BP740418 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL493l18ex BP740115 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL475o21ex BP728965 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL447d18ex BP720749 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL444j02ex BP719977 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL218g07 BJ643825 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL218c09 BJ643755 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189a03 BJ636012 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL162k13 BJ629758 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
AW782785 AW782785 3' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
rxl263f03 DC077933 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl238e20 DC070933 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15