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Summary Expression Phenotypes Gene Literature (8) GO Terms (7) Nucleotides (212) Proteins (55) Interactants (194) Wiki
XB-GENEPAGE-948034

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for nup54 - Xenopus laevis

RefSeq mRNAs(6)
Models - Gene (9)
Models - mRNA (9)
mRNAs (9)
ESTs (49)

RefSeq mRNAs (6)

Accession Version name Length Protein Species
NM_001089733 NM_001089733.1 nucleoporin 54kDa S homeolog 1813 bp NP_001083202 X. laevis.S
XM_041591079 XM_041591079.1 XP_041447013.1 nucleoporin p54 isoform X1 2941 bp XP_041447013 X. laevis.L
XM_041574012 XM_041574012.1 XP_041429946.1 nucleoporin 54kDa S homeolog isoform X1 2148 bp XP_041429946 X. laevis.S
XM_018234570 XM_018234570.2 nucleoporin 54kDa S homeolog isoform X2 1983 bp XP_018090059 X. laevis.S
XM_018252601 XM_018252601.2 nucleoporin p54 isoform X2 2776 bp XP_018108090 X. laevis.L
XM_018252609 XM_018252609.2 nuclear pore complex protein Nup54 isoform X3 2678 bp XP_018108098 X. laevis.L

Models - Gene (9)

Source Version Model Species
NCBI 10.1 XBXL10_1g4181 X. laevis.S
NCBI 10.1 XBXL10_1g1299 X. laevis.L
JGI 9.1 Xelaev18009519m.g X. laevis.S
JGI 9.1 Xelaev18005850m.g X. laevis.L
Xenbase 9.2 gene45045 X. laevis.S
Xenbase 9.2 gene35678 X. laevis.L
JGI 7.2 Xelaev16060967m.g X. laevis.S
JGI 6.0 XeXenL6RMv10014489m.g X. laevis.S
JGI 6.0 XeXenL6RMv10025887m.g X. laevis.S

mRNAs based on gene models(9)

Source Version Model Species
NCBI 10.1 XBmRNA2136 X. laevis.L
NCBI 10.1 XBmRNA7713 X. laevis.S
JGI 9.1 Xelaev18005850m X. laevis.L
JGI 9.1 Xelaev18009519m X. laevis.S
Xenbase 9.2 rna75736 X. laevis.L
Xenbase 9.2 rna89228 X. laevis.S
JGI 7.2 Xelaev16060967m X. laevis.S
JGI 6.0 XeXenL6RMv10014489m X. laevis.S
JGI 6.0 XeXenL6RMv10025887m X. laevis.S

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:5542167 BC046737 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4031140 BC060003 X. laevis.S
NM_001089733 X. laevis.S
JX993586 X. laevis.S
XM_018252609 X. laevis.L
XM_018252601 X. laevis.L
XM_018234570 X. laevis.S
XM_041574012 X. laevis.S
XM_041591079 X. laevis.L

ESTs (49)

Clone Accession 5'/3' Species Library Anatomy Stage
xl254c08 DC110010 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8643944 EB734572 5' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
XL517i14ex BP706344 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL506f23ex BP702833 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL505f23ex BP702525 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7299723 CO385110 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL172n19 BJ615626 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL169g17 BJ614792 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL166m10 BJ614143 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL152h14 BJ096042 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL054j17 BJ069794 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL004e16 BJ030483 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6881084 CB208287 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6871062 CA983486 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6326773 CA974237 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:5154784 CA792000 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6633156 BU907865 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5542167 BQ735414 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5572832 BQ734185 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4684039 BQ733220 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4203134 BG553177 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
BG409710 BG409710 5' X. laevis.S Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
IMAGE:3402140 BG037707 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:4061519 BG019104 5' X. laevis.S Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:3749252 BF614852 5' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:3744064 BF427330 5' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3744062 BF427329 5' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3300547 BE131771 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3199748 AW767262 5' X. laevis.S Harland stage 19-23 whole organism NF stage 19 to NF stage 23
PBX0088D04 AW639853 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0044C12 AW636233 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl231h05 DC069001 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl254c08 DC075382 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL517i14ex BP738772 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL172n19 BJ632252 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL169g17 BJ631490 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL166m10 BJ630812 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL152h14 BJ100373 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL004e16 BJ045472 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL002m20 BJ045018 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6881084 CB560121 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:4203134 BG579778 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3421249 BG414036 3' X. laevis.S Wellcome CRC pSK St 10 5 whole organism NF stage 10.5
IMAGE:4061519 BG022350 3' X. laevis.S Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:3750471 BG021560 3' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:3749252 BG021387 3' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:3402140 BG019698 3' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3744062 BG016725 3' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3300547 BE027023 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage