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Summary Expression Phenotypes Gene Literature (8) GO Terms (7) Nucleotides (212) Proteins (55) Interactants (194) Wiki
XB-GENEPAGE-948034

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for nup54 - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (18)
Models - mRNA (25)
mRNAs (4)
ESTs (45)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001017349 NM_001017349.3 nucleoporin p54 2021 bp NP_001017349 X. tropicalis

Models - Gene (18)

Source Version Model Species
NCBI 10.0 XBXT10g002882 X. tropicalis
ENSEMBL 10.0 nup54 X. tropicalis
Xenbase 9.1 gene7277 X. tropicalis
ENSEMBL 9.1 nup54 X. tropicalis
JGI 8.0 Xetrov14043177m.g X. tropicalis
JGI 7.1 Xetro.H00429 X. tropicalis
ENSEMBL 4.1 ENSXETG00000024117 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1308000002 X. tropicalis
JGI 4.1 gw1.1308.12.1 X. tropicalis
JGI 4.1 gw1.1308.2.1 X. tropicalis
JGI 4.1 gw1.1308.6.1 X. tropicalis
JGI 4.1 e_gw1.1308.12.1 X. tropicalis
JGI 4.1 e_gw1.1308.2.1 X. tropicalis
JGI 4.1 e_gw1.1308.6.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1308000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1308000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1308000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1308000002 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.0 mRNA014628 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085511 X. tropicalis
ENSEMBL 10.0 ENSXETT00000052045 X. tropicalis
ENSEMBL 10.0 ENSXETT00000098153 X. tropicalis
Xenbase 9.1 rna23524 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098153 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081623 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071217 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085511 X. tropicalis
ENSEMBL 9.1 ENSXETT00000052045 X. tropicalis
JGI 8.0 Xetrov14043177m X. tropicalis
JGI 7.1 Xetro.H00429.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1308000002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052045 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052046 X. tropicalis
JGI 4.1 e_gw1.1308.12.1 X. tropicalis
JGI 4.1 e_gw1.1308.2.1 X. tropicalis
JGI 4.1 e_gw1.1308.6.1 X. tropicalis
JGI 4.1 gw1.1308.12.1 X. tropicalis
JGI 4.1 gw1.1308.2.1 X. tropicalis
JGI 4.1 gw1.1308.6.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1308000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1308000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1308000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1308000002 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
NM_001017349 X. tropicalis
TGas114o17 CR848625 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7007536 BC082534 X. tropicalis
IMAGE:7606162 BC135328 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41

ESTs (45)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8889636 EL848644 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8870092 EL711611 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
XZT11674 CX312015 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO7183 CX940537 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7790192 CX323734 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606162 CX366510 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7543082 CX458570 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555803 CX502636 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556396 CX504389 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7801441 DR834374 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7741363 DN032501 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7733450 DN017874 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7712261 CX969513 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7710055 CX965399 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7698309 CX929916 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7527910 CX424900 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA043d08 CR580223 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA004a13 CR408067 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas144i24 AL968741 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114o17 AL967870 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114c15 AL967812 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas112i11 AL963822 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas072l17 AL775567 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu035o13 AL656225 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6989919 CF219182 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8889636 EL848645 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XZT11674 CX312014 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO7183 CX940536 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7543082 CX458569 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7790192 DR905425 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7801441 DR834373 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7741363 DN032500 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7733450 DN017873 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7712261 CX969512 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7710055 CX965398 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7698309 CX929915 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7556396 CX504388 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555803 CX502635 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7606162 CX366509 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA043d08 CR580224 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA004a13 CR408068 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas144i24 BX761679 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114o17 BX755685 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114c15 BX753293 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas072l17 BX749566 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12