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Summary Expression Phenotypes Gene Literature (0) GO Terms (1) Nucleotides (93) Proteins (43) Interactants (0) Wiki
XB-GENEPAGE-946454

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for lysmd4 - All

RefSeq mRNAs(7)
Models - Gene (26)
Models - mRNA (27)
mRNAs (8)
ESTs (10)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
XM_012959582 XM_012959582.3 lysM and putative peptidoglycan-binding domain-containing protein 4 3715 bp XP_012815036 X. tropicalis
XM_002939265 XM_002939265.5 lysM and putative peptidoglycan-binding domain-containing protein 4 3577 bp XP_002939311 X. tropicalis
NM_001093705 NM_001093705.1 lysM and putative peptidoglycan-binding domain-containing protein 4 2469 bp NP_001087174 X. laevis.L
XM_041585152 XM_041585152.1 XP_041441086.1 lysM and putative peptidoglycan-binding domain-containing protein 4 isoform X1 4496 bp XP_041441086 X. laevis.L
XM_018251049 XM_018251049.2 lysM and putative peptidoglycan-binding domain-containing protein 4 isoform X2 4193 bp XP_018106538 X. laevis.L
XM_018255278 XM_018255278.2 lysM and putative peptidoglycan-binding domain-containing protein 4-like 1755 bp XP_018110767 X. laevis.S
XM_018255279 XM_018255279.2 lysM and putative peptidoglycan-binding domain-containing protein 4-like 1743 bp XP_018110768 X. laevis.S

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g008481 X. tropicalis
NCBI 10.1 XBXL10_1g13373 X. laevis.L
NCBI 10.1 XBXL10_1g15583 X. laevis.S
ENSEMBL 10.0 lysmd4 X. tropicalis
JGI 9.1 Xelaev18018407m.g X. laevis.L
JGI 9.1 Xelaev18020459m.g X. laevis.S
Xenbase 9.1 gene31369 X. tropicalis
Xenbase 9.2 gene9973 X. laevis.L
Xenbase 9.2 gene10805 X. laevis.S
ENSEMBL 9.1 LYSMD4 X. tropicalis
JGI 8.0 Xetrov14046841m.g X. tropicalis
JGI 7.1 Xetro.C00760 X. tropicalis
JGI 7.2 Xelaev16063705m.g X. laevis.L
JGI 6.0 XeXenL6RMv10010325m.g X. laevis.L
JGI 6.0 XeXenL6RMv10044236m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000018786 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_463000005 X. tropicalis
JGI 4.1 e_gw1.463.43.1 X. tropicalis
JGI 4.1 e_gw1.463.56.1 X. tropicalis
JGI 4.1 e_gw1.463.70.1 X. tropicalis
JGI 4.1 gw1.463.43.1 X. tropicalis
JGI 4.1 gw1.463.56.1 X. tropicalis
JGI 4.1 gw1.463.70.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_463000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_463000018 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_463000007 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.0 mRNA042022 X. tropicalis
NCBI 10.1 XBmRNA25381 X. laevis.L
NCBI 10.1 XBmRNA29112 X. laevis.S
ENSEMBL 10.0 ENSXETT00000106245 X. tropicalis
ENSEMBL 10.0 ENSXETT00000088559 X. tropicalis
JGI 9.1 Xelaev18018407m X. laevis.L
JGI 9.1 Xelaev18020459m X. laevis.S
Xenbase 9.1 rna59662 X. tropicalis
Xenbase 9.2 rna28995 X. laevis.L
Xenbase 9.2 rna31403 X. laevis.S
ENSEMBL 9.1 ENSXETT00000088559 X. tropicalis
JGI 8.0 Xetrov14046841m X. tropicalis
JGI 7.1 Xetro.C00760.1 X. tropicalis
JGI 7.2 Xelaev16063705m X. laevis.L
JGI 6.0 XeXenL6RMv10010325m X. laevis.L
JGI 6.0 XeXenL6RMv10044236m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_463000005 X. tropicalis
ENSEMBL 4.1 ENSXETT00000040687 X. tropicalis
JGI 4.1 e_gw1.463.43.1 X. tropicalis
JGI 4.1 e_gw1.463.56.1 X. tropicalis
JGI 4.1 e_gw1.463.70.1 X. tropicalis
JGI 4.1 gw1.463.43.1 X. tropicalis
JGI 4.1 gw1.463.56.1 X. tropicalis
JGI 4.1 gw1.463.70.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_463000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_463000018 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_463000007 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
XM_002939265 X. tropicalis
XM_012959582 X. tropicalis
IMAGE:5085122 BC078121 X. laevis.L
NM_001093705 X. laevis.L
XM_018255279 X. laevis.S
XM_018255278 X. laevis.S
XM_018251049 X. laevis.L
XM_041585152 X. laevis.L

ESTs (10)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7571705 CX512933 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559159 CX498822 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
P002 GH985134 5' X. laevis.L Cornea-lens transdifferentiation library cornea NF stage 50 to NF stage 52
PBX0082E05 AW639408 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL144l05 BJ094190 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL150o22 BJ095622 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
L212 DV034168 5' X. laevis.L Cornea-lens transdifferentiation library cornea NF stage 50 to NF stage 52
xlk104h11ex DC037054 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl222j21 DC100395 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL150o22 BJ099514 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5