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Summary Expression Phenotypes Gene Literature (1) GO Terms (3) Nucleotides (202) Proteins (54) Interactants (83) Wiki
XB-GENEPAGE-946142

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sptlc2 - Xenopus laevis

RefSeq mRNAs(3)
Models - Gene (9)
Models - mRNA (9)
mRNAs (4)
ESTs (31)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001092294 NM_001092294.1 serine palmitoyltransferase, long chain base subunit 2 S homeolog 3836 bp NP_001085763 X. laevis.S
XM_041572975 XM_041572975.1 XP_041428909.1 serine palmitoyltransferase 2 isoform X1 3225 bp XP_041428909 X. laevis.L
XM_018230373 XM_018230373.2 serine palmitoyltransferase 2 isoform X2 3210 bp XP_018085862 X. laevis.L

Models - Gene (9)

Source Version Model Species
NCBI 10.1 XBXL10_1g37399 X. laevis.S
NCBI 10.1 XBXL10_1g35735 X. laevis.L
JGI 9.1 Xelaev18041357m.g X. laevis.S
JGI 9.1 Xelaev18039489m.g X. laevis.L
Xenbase 9.2 gene7883 X. laevis.S
Xenbase 9.2 gene6926 X. laevis.L
JGI 7.2 Xelaev16039070m.g X. laevis.S
JGI 6.0 XeXenL6RMv10020042m.g X. laevis.S
JGI 6.0 XeXenL6RMv10027647m.g X. laevis.S

mRNAs based on gene models(9)

Source Version Model Species
NCBI 10.1 XBmRNA67465 X. laevis.L
NCBI 10.1 XBmRNA70596 X. laevis.S
JGI 9.1 Xelaev18039489m X. laevis.L
JGI 9.1 Xelaev18041357m X. laevis.S
Xenbase 9.2 rna20239 X. laevis.L
Xenbase 9.2 rna23002 X. laevis.S
JGI 7.2 Xelaev16039070m X. laevis.S
JGI 6.0 XeXenL6RMv10020042m X. laevis.S
JGI 6.0 XeXenL6RMv10027647m X. laevis.S

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
IMAGE:5511826 BC073312 X. laevis.S
NM_001092294 X. laevis.S
XM_018230373 X. laevis.L
XM_041572975 X. laevis.L

ESTs (31)

Clone Accession 5'/3' Species Library Anatomy Stage
xl300j19 DC123239 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl262n05 DC112589 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk79a16ex DC060647 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8527779 EB464185 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL404j16ex BP685866 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL505j01ex BP702581 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL407g10ex BP696434 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL429e21ex BP678261 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL145m22 BJ094541 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL066n12 BJ060791 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL045k01 BJ038839 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL042k20 BJ038172 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL013k11 BJ029826 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6936800 CD100322 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6862853 CA986536 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6636018 BU910233 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6632598 BU907425 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:4724961 BQ732027 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
PBX0159A11 AW646025 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0084B05 AW639537 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:2942089 AW460802 5' X. laevis.S Xenla 13LiCl whole organism NF stage 13
rxl300j19 DC088372 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk79a16ex DC027173 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL505j01ex BP735517 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL407g10ex BP730157 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL404j16ex BP721730 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL429e21ex BP715285 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL066n12 BJ079007 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL042k20 BJ052780 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL045k01 BJ050783 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL013k11 BJ044540 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15