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Summary Expression Phenotypes Gene Literature (1) GO Terms (3) Nucleotides (202) Proteins (54) Interactants (83) Wiki
XB-GENEPAGE-946142

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sptlc2 - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (19)
Models - mRNA (31)
mRNAs (3)
ESTs (51)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
XM_002938869 XM_002938869.5 serine palmitoyltransferase 2 3238 bp XP_002938915 X. tropicalis

Models - Gene (19)

Source Version Model Species
NCBI 10.0 XBXT10g000766 X. tropicalis
ENSEMBL 10.0 sptlc2 X. tropicalis
Xenbase 9.1 gene1520 X. tropicalis
ENSEMBL 9.1 sptlc2 X. tropicalis
JGI 8.0 Xetrov14034440m.g X. tropicalis
JGI 7.1 Xetro.H01190 X. tropicalis
ENSEMBL 4.1 ENSXETG00000011085 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_416000008 X. tropicalis
JGI 4.1 e_gw1.416.33.1 X. tropicalis
JGI 4.1 e_gw1.416.42.1 X. tropicalis
JGI 4.1 e_gw1.416.57.1 X. tropicalis
JGI 4.1 e_gw1.416.76.1 X. tropicalis
JGI 4.1 gw1.416.33.1 X. tropicalis
JGI 4.1 gw1.416.42.1 X. tropicalis
JGI 4.1 gw1.416.57.1 X. tropicalis
JGI 4.1 gw1.416.76.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_416000023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_416000024 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_416000007 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.0 mRNA003818 X. tropicalis
ENSEMBL 10.0 ENSXETT00000079650 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082162 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110243 X. tropicalis
Xenbase 9.1 rna4954 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094020 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082162 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082101 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095826 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093224 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094418 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093432 X. tropicalis
ENSEMBL 9.1 ENSXETT00000024212 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079274 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079650 X. tropicalis
JGI 8.0 Xetrov14034440m X. tropicalis
JGI 7.1 Xetro.H01190.1 X. tropicalis
JGI 7.1 Xetro.H01190.2 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_416000008 X. tropicalis
ENSEMBL 4.1 ENSXETT00000024212 X. tropicalis
JGI 4.1 e_gw1.416.33.1 X. tropicalis
JGI 4.1 e_gw1.416.42.1 X. tropicalis
JGI 4.1 e_gw1.416.57.1 X. tropicalis
JGI 4.1 e_gw1.416.76.1 X. tropicalis
JGI 4.1 gw1.416.33.1 X. tropicalis
JGI 4.1 gw1.416.42.1 X. tropicalis
JGI 4.1 gw1.416.57.1 X. tropicalis
JGI 4.1 gw1.416.76.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_416000023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_416000024 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_416000007 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
TGas141g16 CT030467 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7690640 BC166208 X. tropicalis NIH_XGC_tropTe4 testis frog
XM_002938869 X. tropicalis

ESTs (51)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8965763 EL657283 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
XZT11605 CX311909 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7577181 CX422607 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546277 CX499477 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7614535 CX390201 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN12281 CX928863 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7739854 DN029818 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7738322 DN027016 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7717902 CX980117 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7693176 CX920255 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690640 CX915677 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7652465 CX815339 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
THdA010d16 CR567503 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA080c02 CR442850 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA055e09 CR431883 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA077d07 CR429123 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas141g16 AL964530 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas093a12 AL962253 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas116k15 AL960850 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas047i05 AL650868 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA068b21 BX735602 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA044f01 BX721064 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA015m24 BX715382 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu128m20 AL799356 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu106a20 AL796133 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu134k09 AL789822 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas065l14 AL682940 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XZT11605 CX311908 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN12281 CX928862 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7652465 CX815338 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7739854 DN029817 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7738322 DN027015 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7717902 CX980116 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7693176 CX920254 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690640 CX915676 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7546277 CX499476 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552167 CX494252 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7614535 CX390200 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA010d16 CR567504 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA080c02 CR442851 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA055e09 CR431884 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA077d07 CR429124 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas141e16 BX764943 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas116k15 BX755902 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas077a12 AL964280 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas065l14 BX745808 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA068b21 BX735603 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA021p11 BX731595 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA044f01 BX721065 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu134k09 BX699661 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu106a20 BX691177 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21