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Summary Expression Phenotypes Gene Literature (2) GO Terms (10) Nucleotides (156) Proteins (62) Interactants (325) Wiki
XB-GENEPAGE-943657

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for optn - Xenopus laevis

RefSeq mRNAs(5)
Models - Gene (9)
Models - mRNA (9)
mRNAs (7)
ESTs (12)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001097720 NM_001097720.1 Optineurin-like 2169 bp NP_001091189 X. laevis.S
XM_018251181 XM_018251181.2 optineurin isoform X1 2368 bp XP_018106670 X. laevis.L
XM_018251182 XM_018251182.2 optineurin isoform X2 2253 bp XP_018106671 X. laevis.L
XM_018253960 XM_018253960.2 uncharacterized protein LOC100036954 isoform X1 2066 bp XP_018109449 X. laevis.S
NM_001095432 NM_001095432.1 optineurin 2301 bp NP_001088901 X. laevis.L

Models - Gene (9)

Source Version Model Species
NCBI 10.1 XBXL10_1g12831 X. laevis.L
NCBI 10.1 XBXL10_1g16051 X. laevis.S
JGI 9.1 Xelaev18017830m.g X. laevis.L
JGI 9.1 Xelaev18020929m.g X. laevis.S
Xenbase 9.2 gene40900 X. laevis.L
Xenbase 9.2 gene12748 X. laevis.S
JGI 7.2 Xelaev16007392m.g X. laevis.L
JGI 6.0 XeXenL6RMv10009226m.g X. laevis.L
JGI 6.0 XeXenL6RMv10031260m.g X. laevis.L

mRNAs based on gene models(9)

Source Version Model Species
NCBI 10.1 XBmRNA24204 X. laevis.L
NCBI 10.1 XBmRNA30041 X. laevis.S
JGI 9.1 Xelaev18017830m X. laevis.L
JGI 9.1 Xelaev18020929m X. laevis.S
Xenbase 9.2 rna83106 X. laevis.L
Xenbase 9.2 rna37038 X. laevis.S
JGI 7.2 Xelaev16007392m X. laevis.L
JGI 6.0 XeXenL6RMv10009226m X. laevis.L
JGI 6.0 XeXenL6RMv10031260m X. laevis.L

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:8547149 BC129708 X. laevis.S
IMAGE:7205613 BC088724 X. laevis.L
NM_001097720 X. laevis.S
NM_001095432 X. laevis.L
XM_018253960 X. laevis.S
XM_018251182 X. laevis.L
XM_018251181 X. laevis.L

ESTs (12)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8820808 EG572059 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8642685 EB734767 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:8641811 EB732582 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:8536974 EB476652 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:8531364 EB473032 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL072a24 BJ061130 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL079a24 BJ064320 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0022B08 AW634556 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:8820808 EG578049 3' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8641811 EB729783 3' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
XL201m17 BJ639329 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL072a24 BJ079327 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25