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Summary Expression Phenotypes Gene Literature (1) GO Terms (19) Nucleotides (189) Proteins (55) Interactants (47) Wiki
XB-GENEPAGE-943121

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pym1 - All

RefSeq mRNAs(3)
Models - Gene (37)
Models - mRNA (39)
mRNAs (8)
ESTs (76)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001016274 NM_001016274.2 partner of Y14 and mago 1006 bp NP_001016274 X. tropicalis
NM_001094530 NM_001094530.1 partner of Y14 and mago 1315 bp NP_001087999 X. laevis.L
XM_018250032 XM_018250032.2 partner of Y14 and mago 1126 bp XP_018105521 X. laevis.S

Models - Gene (37)

Source Version Model Species
NCBI 10.1 XBXL10_1g10728 X. laevis.S
NCBI 10.1 XBXL10_1g8073 X. laevis.L
NCBI 10.0 XBXT10g013063 X. tropicalis
ENSEMBL 10.0 pym1 X. tropicalis
Xenbase 9.2 gene8832 X. laevis.S
Xenbase 9.2 gene1394 X. laevis.L
JGI 9.1 Xelaev18015892m.g X. laevis.S
JGI 9.1 Xelaev18013389m.g X. laevis.L
Xenbase 9.1 gene4331 X. tropicalis
ENSEMBL 9.1 pym1 X. tropicalis
JGI 8.0 Xetrov14010032m.g X. tropicalis
JGI 7.2 Xelaev16014320m.g X. laevis.L
JGI 7.1 Xetro.B01341 X. tropicalis
JGI 6.0 XeXenL6RMv10035482m.g X. laevis.L
JGI 6.0 XeXenL6RMv10018836m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000021850 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_101000005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_101000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_101000062 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_101000063 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_101000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_101000061 X. tropicalis
JGI 4.1 gw1.101.114.1 X. tropicalis
JGI 4.1 gw1.101.164.1 X. tropicalis
JGI 4.1 gw1.101.21.1 X. tropicalis
JGI 4.1 e_gw1.101.114.1 X. tropicalis
JGI 4.1 e_gw1.101.164.1 X. tropicalis
JGI 4.1 e_gw1.101.21.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1010030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1010021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1010114 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1010162 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1010012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1010061 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1010062 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1010063 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1010015 X. tropicalis

mRNAs based on gene models(39)

Source Version Model Species
NCBI 10.1 XBmRNA20160 X. laevis.S
NCBI 10.1 XBmRNA15271 X. laevis.L
ENSEMBL 10.0 ENSXETT00000078972 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070861 X. tropicalis
NCBI 10.0 mRNA064647 X. tropicalis
Xenbase 9.2 rna4080 X. laevis.L
Xenbase 9.2 rna25729 X. laevis.S
ENSEMBL 9.1 ENSXETT00000078972 X. tropicalis
Xenbase 9.1 rna14126 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070861 X. tropicalis
JGI 9.1 Xelaev18015892m X. laevis.S
JGI 9.1 Xelaev18013389m X. laevis.L
JGI 8.0 Xetrov14010032m X. tropicalis
JGI 7.2 Xelaev16014320m X. laevis.L
JGI 7.1 Xetro.B01341.1 X. tropicalis
JGI 6.0 XeXenL6RMv10035482m X. laevis.L
JGI 6.0 XeXenL6RMv10018836m X. laevis.L
JGI 4.1 fgenesh1_pm.C_scaffold_101000015 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_101000005 X. tropicalis
JGI 4.1 gw1.101.114.1 X. tropicalis
JGI 4.1 gw1.101.164.1 X. tropicalis
JGI 4.1 gw1.101.21.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_101000062 X. tropicalis
JGI 4.1 e_gw1.101.164.1 X. tropicalis
JGI 4.1 e_gw1.101.21.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000047260 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1010012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1010061 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1010062 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1010063 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1010015 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1010030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1010021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1010114 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1010162 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_101000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_101000061 X. tropicalis
JGI 4.1 e_gw1.101.114.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_101000063 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7584786 BC161580 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:9039855 BC170597 X. tropicalis
IMAGE:9039859 BC170601 X. tropicalis
TGas043c07 CR761629 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001016274 X. tropicalis
IMAGE:6874029 BC082679 X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
NM_001094530 X. laevis.L
XM_018250032 X. laevis.S

ESTs (76)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas038j22 AL651838 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas050h08 AL653259 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas068b08 AL681161 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA068a18 CR426684 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas072i03 AL773982 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079n20 AL774683 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas126k24 AL972261 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
st87k24 DC188366 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7584786 CX317547 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st109e16 DC194223 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu111n19 AL792494 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xtbs04J19 CN074134 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
XZT4697 CX400837 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas010g22 AL630510 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XZT11295 CX311407 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA071i14 CR434742 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas043c07 AL651418 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7577651 CX423192 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521074 CX469343 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521885 CX470301 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553439 CX491366 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553930 CX492448 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559122 CX498895 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556909 CX504631 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577651 CX423191 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XZT4697 CX400836 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7521074 CX469342 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
rst87k24 DC158259 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7521885 CX470300 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA068a18 CR426685 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7553439 CX491365 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7584786 CX317546 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7553930 CX492447 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas068b08 BX748453 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7559122 CX498894 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas072i03 BX749510 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7556909 CX504630 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas079n20 BX750620 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas098e24 BX756174 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas095n20 BX763050 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XENOPUS_SOURCE_ID:xlnga003i13 AW200572 5' X. laevis.L normalized Xenopus laevis gastrula whole organism NF stage 10.5 to NF stage 11.5
PBX0144F10 AW644884 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3743953 BF427429 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:7298499 CO383706 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:7295922 CO383724 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:7299205 CO385547 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL036m24 BJ036581 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
xl328b02 DC131462 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL152g12 BJ096025 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL169f13 BJ614776 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL170f13 BJ615029 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL187n15 BJ619053 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL213b11 BJ625920 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL213b12 BJ625921 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8640538 EB728400 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:3749172 BF614557 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL453j08ex BP687220 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL466a15ex BP691665 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk122i07ex DC042818 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk159l23ex DC064001 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk164d04ex DC065435 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
L118 DV034141 5' X. laevis.L Cornea-lens transdifferentiation library cornea NF stage 50 to NF stage 52
IMAGE:6874029 CB199017 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:3302220 BF072211 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL453j08ex BP722861 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3749172 BG021290 3' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL213b12 BJ642325 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL187n15 BJ635696 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL169f13 BJ631479 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL152g12 BJ100354 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxl328b02 DC095542 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk122i07ex DC009738 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk159l23ex DC030491 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk164d04ex DC031905 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL036m24 BJ051794 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6874029 CB564457 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62