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Summary Expression Phenotypes Gene Literature (1) GO Terms (24) Nucleotides (146) Proteins (76) Interactants (22) Wiki
XB-GENEPAGE-942973

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rph3al - All

RefSeq mRNAs(16)
Models - Gene (26)
Models - mRNA (41)
mRNAs (19)
ESTs (13)

RefSeq mRNAs (16)

Accession Version Protein Name Length Protein Species
NM_001011007 NM_001011007.1 rab effector Noc2 1268 bp NP_001011007 X. tropicalis
XM_012956827 XM_012956827.3 rab effector Noc2 isoform X1 1489 bp XP_012812281 X. tropicalis
XM_012956828 XM_012956828.3 rab effector Noc2 isoform X1 1470 bp XP_012812282 X. tropicalis
XM_012956829 XM_012956829.3 rab effector Noc2 isoform X1 1305 bp XP_012812283 X. tropicalis
XM_012956830 XM_012956830.3 rab effector Noc2 isoform X1 1286 bp XP_012812284 X. tropicalis
XM_012956832 XM_012956832.3 rab effector Noc2 isoform X1 1241 bp XP_012812286 X. tropicalis
XM_012956833 XM_012956833.3 rab effector Noc2 isoform X1 1223 bp XP_012812287 X. tropicalis
XM_012956834 XM_012956834.3 rab effector Noc2 isoform X2 6174 bp XP_012812288 X. tropicalis
XM_012956835 XM_012956835.3 rab effector Noc2 isoform X3 6117 bp XP_012812289 X. tropicalis
XM_012956836 XM_012956836.3 rab effector Noc2 isoform X3 6017 bp XP_012812290 X. tropicalis
XM_018249658 XM_018249658.2 rab effector Noc2 isoform X1 5642 bp XP_018105147 X. laevis.S
XM_041584109 XM_041584109.1 XP_041440043.1 rab effector Noc2 isoform X1 5692 bp XP_041440043 X. laevis.S
XM_041584110 XM_041584110.1 XP_041440044.1 rab effector Noc2 isoform X1 5650 bp XP_041440044 X. laevis.S
XM_041584111 XM_041584111.1 XP_041440045.1 rab effector Noc2 isoform X1 5599 bp XP_041440045 X. laevis.S
XM_041584112 XM_041584112.1 XP_041440046.1 rab effector Noc2 isoform X2 5634 bp XP_041440046 X. laevis.S
NM_001093893 NM_001093893.1 rabphilin 3A like (without C2 domains) L homeolog 1308 bp NP_001087362 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g7478 X. laevis.L
NCBI 10.1 XBXL10_1g10259 X. laevis.S
NCBI 10.0 XBXT10g015113 X. tropicalis
ENSEMBL 10.0 rph3al X. tropicalis
Xenbase 9.2 gene45767 X. laevis.L
Xenbase 9.2 gene36289 X. laevis.S
JGI 9.1 Xelaev18012729m.g X. laevis.L
JGI 9.1 Xelaev18015346m.g X. laevis.S
Xenbase 9.1 gene26888 X. tropicalis
ENSEMBL 9.1 rph3al X. tropicalis
JGI 7.1 Xetro.B00522 X. tropicalis
JGI 6.0 XeXenL6RMv10044821m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000022428 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000056 X. tropicalis
JGI 4.1 e_gw1.92.171.1 X. tropicalis
JGI 4.1 e_gw1.92.197.1 X. tropicalis
JGI 4.1 e_gw1.92.20.1 X. tropicalis
JGI 4.1 gw1.92.171.1 X. tropicalis
JGI 4.1 gw1.92.197.1 X. tropicalis
JGI 4.1 gw1.92.20.1 X. tropicalis
JGI 4.1 MOL_e_gw1.92.19.1 X. tropicalis
JGI 4.1 MOL_MOL_e_gw1.92.19.1 X. tropicalis
JGI 4.1 mol_MOL_MOL_e_gw1.92.19.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_92000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000055 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_92000013 X. tropicalis

mRNAs based on gene models(41)

Source Version Model Species
NCBI 10.1 XBmRNA19192 X. laevis.S
NCBI 10.1 XBmRNA14098 X. laevis.L
ENSEMBL 10.0 ENSXETT00000048538 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119409 X. tropicalis
NCBI 10.0 mRNA074726 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102882 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080356 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091959 X. tropicalis
ENSEMBL 10.0 ENSXETT00000056630 X. tropicalis
Xenbase 9.2 rna76557 X. laevis.S
Xenbase 9.2 rna90289 X. laevis.L
ENSEMBL 9.1 ENSXETT00000080356 X. tropicalis
ENSEMBL 9.1 ENSXETT00000048538 X. tropicalis
ENSEMBL 9.1 ENSXETT00000056630 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091959 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102882 X. tropicalis
Xenbase 9.1 rna52548 X. tropicalis
JGI 9.1 Xelaev18015346m X. laevis.S
JGI 9.1 Xelaev18012729m X. laevis.L
JGI 7.1 Xetro.B00522.6 X. tropicalis
JGI 7.1 Xetro.B00522.2 X. tropicalis
JGI 7.1 Xetro.B00522.3 X. tropicalis
JGI 7.1 Xetro.B00522.1 X. tropicalis
JGI 7.1 Xetro.B00522.4 X. tropicalis
JGI 7.1 Xetro.B00522.5 X. tropicalis
JGI 6.0 XeXenL6RMv10044821m X. laevis.S
JGI 4.1 e_gw1.92.171.1 X. tropicalis
JGI 4.1 e_gw1.92.20.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000056630 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048538 X. tropicalis
JGI 4.1 e_gw1.92.197.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_92000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000055 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_92000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000056 X. tropicalis
JGI 4.1 gw1.92.171.1 X. tropicalis
JGI 4.1 gw1.92.197.1 X. tropicalis
JGI 4.1 gw1.92.20.1 X. tropicalis
JGI 4.1 MOL_e_gw1.92.19.1 X. tropicalis
JGI 4.1 MOL_MOL_e_gw1.92.19.1 X. tropicalis
JGI 4.1 mol_MOL_MOL_e_gw1.92.19.1 X. tropicalis

mRNAs from cDNA libraries (19)

Clone Accession Species Library Anatomy Stage
IMAGE:7006106 BC082720 X. tropicalis
TEgg075o07 CR761174 X. tropicalis
NM_001011007 X. tropicalis
XM_012956827 X. tropicalis
XM_012956828 X. tropicalis
XM_012956829 X. tropicalis
XM_012956830 X. tropicalis
XM_012956832 X. tropicalis
XM_012956833 X. tropicalis
XM_012956834 X. tropicalis
XM_012956835 X. tropicalis
XM_012956836 X. tropicalis
XM_018249658 X. laevis.S
XM_041584109 X. laevis.S
XM_041584110 X. laevis.S
XM_041584111 X. laevis.S
XM_041584112 X. laevis.S
IMAGE:6933119 BC078618 X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
NM_001093893 X. laevis.L

ESTs (13)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7545752 CX488426 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7586645 CX312450 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8889776 EL849243 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7545752 CX488425 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7586645 CX312449 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8889776 EL849244 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:6933119 CB944919 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
PBX0096B08 AW640530 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4678247 BI477933 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xl312m07 DC126869 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL175a05 BJ615924 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
PBX0049F01 AW636761 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl312m07 DC091787 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15