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Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (64) Proteins (41) Interactants (1) Wiki
XB-GENEPAGE-941988

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for optc - All

RefSeq mRNAs(1)
Models - Gene (19)
Models - mRNA (22)
mRNAs (7)
ESTs (4)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001016499 NM_001016499.2 opticin precursor 1410 bp NP_001016499 X. tropicalis

Models - Gene (19)

Source Version Model Species
NCBI 10.0 XBXT10g000006 X. tropicalis
NCBI 10.1 XBXL10_1g9716 X. laevis.S
ENSEMBL 10.0 optc X. tropicalis
JGI 9.1 Xelaev18014871m.g X. laevis.S
Xenbase 9.1 gene7627 X. tropicalis
Xenbase 9.2 gene1382 X. laevis.S
ENSEMBL 9.1 optc X. tropicalis
JGI 7.1 Xetro.A01252 X. tropicalis
JGI 6.0 XeXenL6RMv10034773m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000000442 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_41000005 X. tropicalis
JGI 4.1 e_gw1.41.13.1 X. tropicalis
JGI 4.1 e_gw1.41.394.1 X. tropicalis
JGI 4.1 e_gw1.41.48.1 X. tropicalis
JGI 4.1 gw1.41.13.1 X. tropicalis
JGI 4.1 gw1.41.394.1 X. tropicalis
JGI 4.1 gw1.41.48.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_41000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_41000022 X. tropicalis

mRNAs based on gene models(22)

Source Version Model Species
NCBI 10.0 mRNA000039 X. tropicalis
NCBI 10.1 XBmRNA18164 X. laevis.S
ENSEMBL 10.0 ENSXETT00000116697 X. tropicalis
ENSEMBL 10.0 ENSXETT00000000938 X. tropicalis
ENSEMBL 10.0 ENSXETT00000060164 X. tropicalis
JGI 9.1 Xelaev18014871m X. laevis.S
Xenbase 9.1 rna24555 X. tropicalis
Xenbase 9.2 rna4040 X. laevis.S
ENSEMBL 9.1 ENSXETT00000060164 X. tropicalis
ENSEMBL 9.1 ENSXETT00000000938 X. tropicalis
JGI 7.1 Xetro.A01252.1 X. tropicalis
JGI 6.0 XeXenL6RMv10034773m X. laevis.S
JGI 4.1 fgenesh1_kg.C_scaffold_41000005 X. tropicalis
ENSEMBL 4.1 ENSXETT00000000938 X. tropicalis
JGI 4.1 e_gw1.41.13.1 X. tropicalis
JGI 4.1 e_gw1.41.394.1 X. tropicalis
JGI 4.1 e_gw1.41.48.1 X. tropicalis
JGI 4.1 gw1.41.13.1 X. tropicalis
JGI 4.1 gw1.41.394.1 X. tropicalis
JGI 4.1 gw1.41.48.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_41000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_41000022 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
NM_001016499 X. tropicalis
TTpA008m17 CR760802 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XM_012962412 X. tropicalis
XM_018091263 X. tropicalis
XM_012962407 X. tropicalis
XM_012962404 X. tropicalis
XM_018249305 X. laevis.S

ESTs (4)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA080e09 CR441237 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA008m17 BX706213 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA080e09 CR441238 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA008m17 BX706214 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40