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Summary Expression Phenotypes Gene Literature (1) GO Terms (1) Nucleotides (137) Proteins (67) Interactants (14) Wiki
XB-GENEPAGE-941394

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hps4 - All

RefSeq mRNAs(4)
Models - Gene (29)
Models - mRNA (38)
mRNAs (14)
ESTs (25)

RefSeq mRNAs (4)

Accession Version name Length Protein Species
NM_001079004 NM_001079004.1 BLOC-3 complex member HPS4 3559 bp NP_001072472 X. tropicalis
LC577762 LC577762.1 BCL51467.1 Hermansky-Pudlak Syndrome 4 L homeolog 2081 bp BCL51467 X. laevis.L
LC577763 LC577763.1 BCL51468.1 Hermansky-Pudlak Syndrome 4 L homeolog 1984 bp BCL51468 X. laevis.L
NM_001095131 NM_001095131.1 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 L homeolog 3349 bp NP_001088600 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.0 XBXT10g005088 X. tropicalis
NCBI 10.1 XBXL10_1g2576 X. laevis.L
ENSEMBL 10.0 hps4 X. tropicalis
JGI 9.1 Xelaev18007501m.g X. laevis.L
Xenbase 9.1 gene7754 X. tropicalis
Xenbase 9.2 gene17280 X. laevis.L
ENSEMBL 9.1 cacna1a X. tropicalis
JGI 8.0 Xetrov14001798m.g X. tropicalis
JGI 7.1 Xetro.A00952 X. tropicalis
JGI 7.2 Xelaev16047680m.g X. laevis.L
JGI 6.0 XeXenL6RMv10001453m.g X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_17000014 X. tropicalis
JGI 4.1 e_gw1.17.217.1 X. tropicalis
JGI 4.1 e_gw1.17.294.1 X. tropicalis
JGI 4.1 e_gw1.17.296.1 X. tropicalis
JGI 4.1 gw1.17.217.1 X. tropicalis
JGI 4.1 gw1.17.294.1 X. tropicalis
JGI 4.1 gw1.17.296.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_170035 X. tropicalis
JGI 4.1 estExt_Genewise1.C_170216 X. tropicalis
JGI 4.1 estExt_Genewise1.C_170293 X. tropicalis
JGI 4.1 estExt_Genewise1.C_170295 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_170014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_170064 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_170065 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_170020 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_17000065 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_17000066 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_17000021 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.0 mRNA025235 X. tropicalis
NCBI 10.1 XBmRNA4503 X. laevis.L
ENSEMBL 10.0 ENSXETT00000061103 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080809 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067238 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066041 X. tropicalis
JGI 9.1 Xelaev18007501m X. laevis.L
Xenbase 9.1 rna24953 X. tropicalis
Xenbase 9.2 rna50424 X. laevis.L
ENSEMBL 9.1 ENSXETT00000061103 X. tropicalis
ENSEMBL 9.1 ENSXETT00000065638 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080809 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067238 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066041 X. tropicalis
JGI 8.0 Xetrov14001798m X. tropicalis
JGI 7.1 Xetro.A00952.2 X. tropicalis
JGI 7.1 Xetro.A00952.3 X. tropicalis
JGI 7.1 Xetro.A00952.1 X. tropicalis
JGI 7.2 Xelaev16047680m X. laevis.L
JGI 6.0 XeXenL6RMv10001453m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_17000014 X. tropicalis
JGI 4.1 e_gw1.17.217.1 X. tropicalis
JGI 4.1 e_gw1.17.294.1 X. tropicalis
JGI 4.1 e_gw1.17.296.1 X. tropicalis
JGI 4.1 gw1.17.217.1 X. tropicalis
JGI 4.1 gw1.17.294.1 X. tropicalis
JGI 4.1 gw1.17.296.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_170035 X. tropicalis
JGI 4.1 estExt_Genewise1.C_170216 X. tropicalis
JGI 4.1 estExt_Genewise1.C_170293 X. tropicalis
JGI 4.1 estExt_Genewise1.C_170295 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_170014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_170064 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_170065 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_170020 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_17000065 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_17000066 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_17000021 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
NM_001079004 X. tropicalis
IMAGE:7689728 BC121887 X. tropicalis NIH_XGC_tropTe4 testis frog
TEgg064j24 CT027849 X. tropicalis
XM_012965319 X. tropicalis
XM_012965326 X. tropicalis
XM_012965322 X. tropicalis
XM_012965308 X. tropicalis
IMAGE:5507115 BC085071 X. laevis.L
NM_001095131 X. laevis.L
XM_018248685 X. laevis.L
XM_018248678 X. laevis.L
XM_018248671 X. laevis.L
LC577763 X. laevis.L
LC577762 X. laevis.L

ESTs (25)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9018241 EL866420 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9011343 EL855911 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs17L03 CN080197 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
CAAO7694 CX941467 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAN11982 CX928294 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7703109 CX938958 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7695418 CX924462 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689728 CX913549 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7652670 CX820777 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:9018241 EL866421 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs17L03 CN080196 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
CAAO7694 CX941466 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7703109 CX938957 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7689728 CX913548 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7652670 CX820776 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
xl246k13 DC107760 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk81d04ex DC061654 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL143h22 BJ093780 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL087n18 BJ075229 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL052b05 BJ069198 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl246k13 DC073288 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk81d04ex DC028132 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL143h22 BJ097878 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL087n18 BJ092609 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL052b05 BJ086114 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25