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XB-GENEPAGE-941367
Nucleotide sequences for col18a1 - All
RefSeq mRNAs(2) |
Models - Gene (35) |
Models - mRNA (49) |
mRNAs (21) |
ESTs (183) |
RefSeq mRNAs (2)
Accession | Version | name | Length | Protein | Species |
NM_001087652 | NM_001087652.1 | collagen type XVIII alpha 1 L homeolog precursor | 5358 bp | NP_001081121 | X. laevis.L |
NM_001088739 | NM_001088739.1 | collagen type XVIII alpha 1 S homeolog precursor | 5598 bp | NP_001082208 | X. laevis.S |
Models - Gene (35)
Source | Version | Model | Species |
NCBI | 10.0 | XBXT10g001118 | X. tropicalis |
NCBI | 10.1 | XBXL10_1g40769 | X. laevis.L |
NCBI | 10.1 | XBXL10_1g43566 | X. laevis.S |
ENSEMBL | 10.0 | col18a1 | X. tropicalis |
JGI | 9.1 | Xelaev18044797m.g | X. laevis.L |
JGI | 9.1 | Xelaev18047249m.g | X. laevis.S |
Xenbase | 9.1 | gene24327 | X. tropicalis |
Xenbase | 9.2 | gene40606 | X. laevis.L |
Xenbase | 9.2 | gene34504 | X. laevis.S |
ENSEMBL | 9.1 | col18a1 | X. tropicalis |
JGI | 8.0 | Xetrov14037400m.g | X. tropicalis |
JGI | 7.1 | Xetro.I00907 | X. tropicalis |
JGI | 7.2 | Xelaev16053288m.g | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10001930m.g | X. laevis.L |
ENSEMBL | 4.1 | ENSXETG00000011481 | X. tropicalis |
JGI | 4.1 | fgenesh1_kg.C_scaffold_15000014 | X. tropicalis |
JGI | 4.1 | gw1.15.241.1 | X. tropicalis |
JGI | 4.1 | gw1.15.243.1 | X. tropicalis |
JGI | 4.1 | gw1.15.244.1 | X. tropicalis |
JGI | 4.1 | gw1.15.259.1 | X. tropicalis |
JGI | 4.1 | gw1.15.266.1 | X. tropicalis |
JGI | 4.1 | gw1.15.269.1 | X. tropicalis |
JGI | 4.1 | e_gw1.15.241.1 | X. tropicalis |
JGI | 4.1 | e_gw1.15.243.1 | X. tropicalis |
JGI | 4.1 | e_gw1.15.244.1 | X. tropicalis |
JGI | 4.1 | e_gw1.15.259.1 | X. tropicalis |
JGI | 4.1 | e_gw1.15.266.1 | X. tropicalis |
JGI | 4.1 | e_gw1.15.269.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_150062 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_150241 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_150243 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_150244 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_kg.C_150013 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_150088 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_15000089 | X. tropicalis |
mRNAs based on gene models(49)
Source | Version | Model | Species |
NCBI | 10.0 | mRNA005601 | X. tropicalis |
NCBI | 10.1 | XBmRNA76773 | X. laevis.L |
NCBI | 10.1 | XBmRNA81976 | X. laevis.S |
ENSEMBL | 10.0 | ENSXETT00000071709 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000115953 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000106767 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000045603 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000025061 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000088503 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000025064 | X. tropicalis |
JGI | 9.1 | Xelaev18044797m | X. laevis.L |
JGI | 9.1 | Xelaev18047249m | X. laevis.S |
Xenbase | 9.1 | rna48456 | X. tropicalis |
Xenbase | 9.2 | rna82682 | X. laevis.L |
Xenbase | 9.2 | rna74098 | X. laevis.S |
ENSEMBL | 9.1 | ENSXETT00000045603 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000025064 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000025061 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000071709 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000088503 | X. tropicalis |
JGI | 8.0 | Xetrov14037400m | X. tropicalis |
JGI | 7.1 | Xetro.I00907.2 | X. tropicalis |
JGI | 7.1 | Xetro.I00907.3 | X. tropicalis |
JGI | 7.1 | Xetro.I00907.4 | X. tropicalis |
JGI | 7.1 | Xetro.I00907.1 | X. tropicalis |
JGI | 7.2 | Xelaev16053288m | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10001930m | X. laevis.L |
JGI | 4.1 | fgenesh1_kg.C_scaffold_15000014 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000025064 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000025061 | X. tropicalis |
JGI | 4.1 | e_gw1.15.241.1 | X. tropicalis |
JGI | 4.1 | e_gw1.15.243.1 | X. tropicalis |
JGI | 4.1 | e_gw1.15.244.1 | X. tropicalis |
JGI | 4.1 | e_gw1.15.259.1 | X. tropicalis |
JGI | 4.1 | e_gw1.15.266.1 | X. tropicalis |
JGI | 4.1 | e_gw1.15.269.1 | X. tropicalis |
JGI | 4.1 | gw1.15.241.1 | X. tropicalis |
JGI | 4.1 | gw1.15.243.1 | X. tropicalis |
JGI | 4.1 | gw1.15.244.1 | X. tropicalis |
JGI | 4.1 | gw1.15.259.1 | X. tropicalis |
JGI | 4.1 | gw1.15.266.1 | X. tropicalis |
JGI | 4.1 | gw1.15.269.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_150062 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_150241 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_150243 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_150244 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_kg.C_150013 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_150088 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_15000089 | X. tropicalis |
mRNAs from cDNA libraries (21)
Clone | Accession | Species | Library | Anatomy | Stage |
NM_203905 | X. tropicalis | ||||
IMAGE:5379380 | BC063929 | X. tropicalis | NICHD_XGC_Emb7 | whole organism | NF stage 20 to NF stage 27 |
IMAGE:6979549 | BC076669 | X. tropicalis | NICHD_XGC_Emb7 | whole organism | NF stage 20 to NF stage 27 |
XM_012970907 | X. tropicalis | ||||
XM_012970906 | X. tropicalis | ||||
XM_012970904 | X. tropicalis | ||||
XM_012970903 | X. tropicalis | ||||
XM_012970905 | X. tropicalis | ||||
13a | AB047066 | X. laevis.S | |||
AY052765 | X. laevis.L | ||||
AY052764 | X. laevis.L | ||||
AY052763 | X. laevis.L | ||||
NM_001087652 | X. laevis.L | ||||
NM_001088739 | X. laevis.S | ||||
XM_018237344 | X. laevis.S | ||||
XM_018237343 | X. laevis.S | ||||
XM_018237341 | X. laevis.S | ||||
XM_018237340 | X. laevis.S | ||||
XM_018234126 | X. laevis.L | ||||
XM_018234125 | X. laevis.L | ||||
XM_018234124 | X. laevis.L |