Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (2) Nucleotides (113) Proteins (71) Interactants (196) Wiki
XB-GENEPAGE-940632

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for usp54 - All

RefSeq mRNAs(7)
Models - Gene (20)
Models - mRNA (26)
mRNAs (24)
ESTs (4)

RefSeq mRNAs (7)

Accession Version name Length Protein Species
XM_041568850 XM_041568850.1 XP_041424784.1 inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X5 3935 bp XP_041424784 X. laevis.L
XM_041571102 XM_041571102.1 XP_041427036.1 inactive ubiquitin carboxyl-terminal hydrolase 54-like isoform X1 7857 bp XP_041427036 X. laevis.S
XM_041571103 XM_041571103.1 XP_041427037.1 inactive ubiquitin carboxyl-terminal hydrolase 54-like isoform X1 7971 bp XP_041427037 X. laevis.S
XM_041571104 XM_041571104.1 XP_041427038.1 inactive ubiquitin carboxyl-terminal hydrolase 54-like isoform X2 7723 bp XP_041427038 X. laevis.S
XM_041571105 XM_041571105.1 XP_041427039.1 inactive ubiquitin carboxyl-terminal hydrolase 54-like isoform X3 7683 bp XP_041427039 X. laevis.S
XM_041571106 XM_041571106.1 XP_041427040.1 inactive ubiquitin carboxyl-terminal hydrolase 54-like isoform X4 4256 bp XP_041427040 X. laevis.S
XM_041568849 XM_041568849.1 XP_041424783.1 inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X4 6412 bp XP_041424783 X. laevis.L

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g013040 X. tropicalis
NCBI 10.1 XBXL10_1g30638 X. laevis.L
NCBI 10.1 XBXL10_1g32885 X. laevis.S
ENSEMBL 10.0 usp54 X. tropicalis
JGI 9.1 Xelaev18034888m.g X. laevis.L
JGI 9.1 Xelaev18037144m.g X. laevis.S
Xenbase 9.1 gene27495 X. tropicalis
Xenbase 9.2 gene11760 X. laevis.L
ENSEMBL 9.1 usp54 X. tropicalis
JGI 7.1 Xetro.G00792 X. tropicalis
JGI 6.0 XeXenL6RMv10008962m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000010009 X. tropicalis
JGI 4.1 gw1.168.92.1 X. tropicalis
JGI 4.1 e_gw1.168.22.1 X. tropicalis
JGI 4.1 e_gw1.168.92.1 X. tropicalis
JGI 4.1 e_gw1.168.96.1 X. tropicalis
JGI 4.1 gw1.168.96.1 X. tropicalis
JGI 4.1 gw1.168.22.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_168000015 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_168000007 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.0 mRNA064450 X. tropicalis
NCBI 10.1 XBmRNA57732 X. laevis.L
NCBI 10.1 XBmRNA62103 X. laevis.S
ENSEMBL 10.0 ENSXETT00000085893 X. tropicalis
ENSEMBL 10.0 ENSXETT00000084305 X. tropicalis
JGI 9.1 Xelaev18034888m X. laevis.L
JGI 9.1 Xelaev18037144m X. laevis.S
Xenbase 9.1 rna53540 X. tropicalis
Xenbase 9.2 rna34153 X. laevis.L
ENSEMBL 9.1 ENSXETT00000085893 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089330 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084305 X. tropicalis
ENSEMBL 9.1 ENSXETT00000055737 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098493 X. tropicalis
JGI 7.1 Xetro.G00792.1 X. tropicalis
JGI 6.0 XeXenL6RMv10008962m X. laevis.L
JGI 4.1 gw1.168.92.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000055737 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022046 X. tropicalis
JGI 4.1 e_gw1.168.22.1 X. tropicalis
JGI 4.1 e_gw1.168.92.1 X. tropicalis
JGI 4.1 e_gw1.168.96.1 X. tropicalis
JGI 4.1 gw1.168.96.1 X. tropicalis
JGI 4.1 gw1.168.22.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_168000015 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_168000007 X. tropicalis

mRNAs from cDNA libraries (24)

Clone Accession Species Library Anatomy Stage
TEgg046m11 CT485684 X. tropicalis
XM_004915934 X. tropicalis
XM_004915931 X. tropicalis
XM_012966848 X. tropicalis
XM_004915930 X. tropicalis
XM_004915933 X. tropicalis
XM_004915929 X. tropicalis
XM_004915932 X. tropicalis
XM_018095874 X. tropicalis
XM_031906119 X. tropicalis
XM_031906118 X. tropicalis
XM_031906117 X. tropicalis
XM_018225430 X. laevis.L
XM_018225429 X. laevis.L
XM_018225427 X. laevis.L
XM_018225426 X. laevis.L
XM_018225425 X. laevis.L
XM_041568850 X. laevis.L
XM_041568849 X. laevis.L
XM_041571106 X. laevis.S
XM_041571105 X. laevis.S
XM_041571104 X. laevis.S
XM_041571103 X. laevis.S
XM_041571102 X. laevis.S

ESTs (4)

Clone Accession 5'/3' Species Library Anatomy Stage
xl284e23 DC118710 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl289d06 DC120113 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl318n15 DC128624 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGp998I078295 BX845623 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25