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Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (117) Proteins (42) Interactants (31) Wiki
XB-GENEPAGE-940575

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ptcd1 - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (21)
Models - mRNA (24)
mRNAs (3)
ESTs (23)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
XM_002931521 XM_002931521.5 pentatricopeptide repeat-containing protein 1, mitochondrial 2279 bp XP_002931567 X. tropicalis

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g006136 X. tropicalis
ENSEMBL 10.0 ptcd1 X. tropicalis
Xenbase 9.1 gene19496 X. tropicalis
ENSEMBL 9.1 ptcd1 X. tropicalis
JGI 8.0 Xetrov14037981m.g X. tropicalis
JGI 7.1 Xetro.I00759 X. tropicalis
ENSEMBL 4.1 ENSXETG00000009891 X. tropicalis
JGI 4.1 gw1.2.529.1 X. tropicalis
JGI 4.1 e_gw1.2.14.1 X. tropicalis
JGI 4.1 e_gw1.2.466.1 X. tropicalis
JGI 4.1 e_gw1.2.529.1 X. tropicalis
JGI 4.1 gw1.2.14.1 X. tropicalis
JGI 4.1 gw1.2.466.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_20023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20466 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20529 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_20016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000043 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_2000017 X. tropicalis

mRNAs based on gene models(24)

Source Version Model Species
NCBI 10.0 mRNA030317 X. tropicalis
ENSEMBL 10.0 ENSXETT00000021779 X. tropicalis
Xenbase 9.1 rna40721 X. tropicalis
ENSEMBL 9.1 ENSXETT00000021779 X. tropicalis
JGI 8.0 Xetrov14037981m X. tropicalis
JGI 7.1 Xetro.I00759.2 X. tropicalis
JGI 7.1 Xetro.I00759.3 X. tropicalis
JGI 7.1 Xetro.I00759.4 X. tropicalis
JGI 7.1 Xetro.I00759.1 X. tropicalis
JGI 4.1 gw1.2.529.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021779 X. tropicalis
JGI 4.1 e_gw1.2.14.1 X. tropicalis
JGI 4.1 e_gw1.2.466.1 X. tropicalis
JGI 4.1 e_gw1.2.529.1 X. tropicalis
JGI 4.1 gw1.2.14.1 X. tropicalis
JGI 4.1 gw1.2.466.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_20023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20466 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20529 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_20016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000043 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_2000017 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
TGas076b24 CT025411 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7822494 BC157260 X. tropicalis
XM_002931521 X. tropicalis

ESTs (23)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7578274 CX416394 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553545 CX491439 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7602058 CX365741 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7536800 CX445304 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559027 CX498573 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557519 CX506163 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7736604 DN023509 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
TTbA040h03 CR444610 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA001b24 CR408430 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr01P08 CN119600 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas092b24 AL964077 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas076b24 AL775292 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA040m14 BX715596 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu011p19 AL639673 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7536800 CX445303 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559027 CX498572 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7602058 DR892974 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7736604 DN023508 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7557519 CX506162 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553545 CX491438 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7578274 CX416393 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA040h03 CR444611 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA001b24 CR408431 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30