Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (26) Nucleotides (154) Proteins (51) Interactants (22) Wiki
XB-GENEPAGE-922035

Show:     All X. tropicalis X. laevis

Nucleotide sequences for trappc4 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (25)
Models - mRNA (29)
mRNAs (6)
ESTs (38)

RefSeq mRNAs (2)

Accession Version Protein Name Length Protein Species
NM_001142905 NM_001142905.2 trafficking protein particle complex subunit 4 992 bp NP_001136377 X. tropicalis
XM_018095427 XM_018095427.2 trafficking protein particle complex subunit 4 isoform X1 1108 bp XP_017950916 X. tropicalis

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g001761 X. tropicalis
ENSEMBL 10.0 trappc4 X. tropicalis
Xenbase 9.1 gene139 X. tropicalis
ENSEMBL 9.1 trappc4 X. tropicalis
JGI 8.0 Xetrov14030609m.g X. tropicalis
JGI 7.1 Xetro.G01259 X. tropicalis
ENSEMBL 4.1 ENSXETG00000010072 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_390007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_390015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_390162 X. tropicalis
JGI 4.1 estExt_Genewise1.C_390259 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_390003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_390007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_390003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_39000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_39000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_39000007 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_39000003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_390006 X. tropicalis
JGI 4.1 e_gw1.39.15.1 X. tropicalis
JGI 4.1 e_gw1.39.164.1 X. tropicalis
JGI 4.1 e_gw1.39.262.1 X. tropicalis
JGI 4.1 gw1.39.15.1 X. tropicalis
JGI 4.1 gw1.39.164.1 X. tropicalis
JGI 4.1 gw1.39.262.1 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000090664 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080406 X. tropicalis
NCBI 10.0 mRNA008887 X. tropicalis
ENSEMBL 10.0 ENSXETT00000022197 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080406 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090664 X. tropicalis
ENSEMBL 9.1 ENSXETT00000022197 X. tropicalis
Xenbase 9.1 rna408 X. tropicalis
JGI 8.0 Xetrov14030609m X. tropicalis
JGI 7.1 Xetro.G01259.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_390162 X. tropicalis
JGI 4.1 estExt_Genewise1.C_390259 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_39000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_39000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_39000007 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_39000003 X. tropicalis
JGI 4.1 gw1.39.15.1 X. tropicalis
JGI 4.1 gw1.39.164.1 X. tropicalis
JGI 4.1 gw1.39.262.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_390007 X. tropicalis
JGI 4.1 e_gw1.39.164.1 X. tropicalis
JGI 4.1 e_gw1.39.262.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022197 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_390003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_390006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_390007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_390003 X. tropicalis
JGI 4.1 e_gw1.39.15.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_390015 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7801295 BC121584 X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:9017596 BC152700 X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8898169 BC166938 X. tropicalis
THdA043g03 CU075488 X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
NM_001142905 X. tropicalis
XM_018095427 X. tropicalis

ESTs (38)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9017596 EL866018 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs34H03 CN091127 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs21E04 CN082567 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs15E04 CN078658 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xthr26C10 CN104655 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA016h16 CR428967 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA052c20 CR586965 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA043g03 CR575581 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
XZT5308 CX414323 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7522666 CX471994 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577272 CX422892 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7673367 CX882851 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
CAAO4864 CX936330 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7801295 DR834359 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
st25p02 DC170494 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8929499 EL678378 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8930740 EL664743 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8922352 EL837159 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8855544 EL818476 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TNeu007i17 AL635294 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xtbs34H03 CN091126 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7577272 CX422891 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs21E04 CN082566 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs17A10 CN079929 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8929499 EL678377 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
xtbs15E04 CN078657 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8923541 EL666998 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
xthr26C10 CN104654 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA016h16 CR428968 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
CAAO4864 CX936329 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:9017596 EL866019 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
THdA043g03 CR575582 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7801295 DR834358 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
XZT5308 DR890124 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8930740 EL664742 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
rst25p02 DC140331 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7522666 CX471993 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8922352 EL837160 3' X. tropicalis NICHD_XGC_tropTe1 testis frog