Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (5) Nucleotides (162) Proteins (63) Interactants (30) Wiki
XB-GENEPAGE-920563

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sh3bp5l - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (25)
Models - mRNA (26)
mRNAs (5)
ESTs (18)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001100250 NM_001100250.1 SH3 domain-binding protein 5-like 1886 bp NP_001093720 X. tropicalis

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g018378 X. tropicalis
ENSEMBL 10.0 sh3bp5l X. tropicalis
Xenbase 9.1 gene7578 X. tropicalis
ENSEMBL 9.1 sh3bp5l X. tropicalis
JGI 8.0 Xetrov14033870m.g X. tropicalis
JGI 7.1 Xetro.H01005 X. tropicalis
ENSEMBL 4.1 ENSXETG00000020349 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3960050 X. tropicalis
JGI 4.1 e_gw1.396.100.1 X. tropicalis
JGI 4.1 e_gw1.396.121.1 X. tropicalis
JGI 4.1 e_gw1.396.73.1 X. tropicalis
JGI 4.1 gw1.396.100.1 X. tropicalis
JGI 4.1 gw1.396.121.1 X. tropicalis
JGI 4.1 gw1.396.73.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3960030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960073 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960100 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960121 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3960012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3960051 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3960013 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_396000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_396000050 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_396000051 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_396000013 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.0 mRNA090713 X. tropicalis
ENSEMBL 10.0 ENSXETT00000043899 X. tropicalis
Xenbase 9.1 rna24401 X. tropicalis
ENSEMBL 9.1 ENSXETT00000043899 X. tropicalis
JGI 8.0 Xetrov14033870m X. tropicalis
JGI 7.1 Xetro.H01005.1 X. tropicalis
JGI 7.1 Xetro.H01005.2 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3960050 X. tropicalis
ENSEMBL 4.1 ENSXETT00000043899 X. tropicalis
JGI 4.1 e_gw1.396.100.1 X. tropicalis
JGI 4.1 e_gw1.396.121.1 X. tropicalis
JGI 4.1 e_gw1.396.73.1 X. tropicalis
JGI 4.1 gw1.396.100.1 X. tropicalis
JGI 4.1 gw1.396.121.1 X. tropicalis
JGI 4.1 gw1.396.73.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3960030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960073 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960100 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960121 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3960012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3960051 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3960013 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_396000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_396000050 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_396000051 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_396000013 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7604042 BC135413 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001100250 X. tropicalis
XM_012967846 X. tropicalis
XM_012967845 X. tropicalis
XM_012967844 X. tropicalis

ESTs (18)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8858117 EL821540 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8935809 EL637627 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7624431 CX401586 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7604042 CX396011 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603125 CX394655 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7852105 DT391871 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7573009 CX435954 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7803575 DR838571 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
TTpA016f22 BX714763 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas084g19 AL774574 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8858117 EL821541 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8935809 EL637626 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7852105 DT391870 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7803575 DR838570 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7573009 CX435953 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7624431 CX401585 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7604042 CX396010 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603125 CX394654 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41