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Summary Expression Phenotypes Gene Literature (1) GO Terms (24) Nucleotides (132) Proteins (39) Interactants (414) Wiki
XB-GENEPAGE-877278

Show:     All X. tropicalis X. laevis

Nucleotide sequences for trmt10c - All

RefSeq mRNAs(5)
Models - Gene (26)
Models - mRNA (26)
mRNAs (7)
ESTs (42)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001102837 NM_001102837.1 tRNA methyltransferase 10 homolog C precursor 2036 bp NP_001096307 X. tropicalis
XM_018247017 XM_018247017.2 tRNA methyltransferase 10 homolog C 2327 bp XP_018102506 X. laevis.L
XM_018247018 XM_018247018.2 tRNA methyltransferase 10 homolog C 1954 bp XP_018102507 X. laevis.L
XM_018247019 XM_018247019.2 tRNA methyltransferase 10 homolog C 2292 bp XP_018102508 X. laevis.L
XM_018249727 XM_018249727.2 tRNA methyltransferase 10 homolog C 2031 bp XP_018105216 X. laevis.S

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g7654 X. laevis.L
NCBI 10.1 XBXL10_1g10365 X. laevis.S
NCBI 10.0 XBXT10g018358 X. tropicalis
ENSEMBL 10.0 trmt10c X. tropicalis
Xenbase 9.2 gene1149 X. laevis.L
Xenbase 9.2 gene2963 X. laevis.S
JGI 9.1 Xelaev18012866m.g X. laevis.L
JGI 9.1 Xelaev18015442m.g X. laevis.S
Xenbase 9.1 gene6272 X. tropicalis
ENSEMBL 9.1 trmt10c X. tropicalis
JGI 8.0 Xetrov14009058m.g X. tropicalis
JGI 7.2 Xelaev16020542m.g X. laevis.L
JGI 7.1 Xetro.B00684 X. tropicalis
JGI 6.0 XeXenL6RMv10000542m.g X. laevis.L
JGI 4.1 estExt_Genewise1.C_2410079 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2410077 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2410018 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2410019 X. tropicalis
JGI 4.1 gw1.241.79.1 X. tropicalis
JGI 4.1 gw1.241.77.1 X. tropicalis
JGI 4.1 e_gw1.241.79.1 X. tropicalis
JGI 4.1 e_gw1.241.77.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_241000043 X. tropicalis
JGI 4.1 e_gw1.241.18.1 X. tropicalis
JGI 4.1 gw1.241.18.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2410043 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.1 XBmRNA14369 X. laevis.L
NCBI 10.1 XBmRNA19361 X. laevis.S
NCBI 10.0 mRNA090617 X. tropicalis
ENSEMBL 10.0 ENSXETT00000065237 X. tropicalis
Xenbase 9.2 rna3337 X. laevis.L
Xenbase 9.2 rna8585 X. laevis.S
JGI 9.1 Xelaev18015442m X. laevis.S
JGI 9.1 Xelaev18012866m X. laevis.L
ENSEMBL 9.1 ENSXETT00000065237 X. tropicalis
Xenbase 9.1 rna20253 X. tropicalis
JGI 8.0 Xetrov14009058m X. tropicalis
JGI 7.2 Xelaev16020542m X. laevis.L
JGI 7.1 Xetro.B00684.1 X. tropicalis
JGI 6.0 XeXenL6RMv10000542m X. laevis.L
JGI 4.1 gw1.241.79.1 X. tropicalis
JGI 4.1 e_gw1.241.77.1 X. tropicalis
JGI 4.1 e_gw1.241.79.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2410043 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2410019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2410018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2410077 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2410079 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_241000043 X. tropicalis
JGI 4.1 gw1.241.18.1 X. tropicalis
JGI 4.1 gw1.241.77.1 X. tropicalis
JGI 4.1 e_gw1.241.18.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7625058 BC135659 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001102837 X. tropicalis
IMAGE:5515647 BC157430 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XM_018247017 X. laevis.L
XM_018247018 X. laevis.L
XM_018247019 X. laevis.L
XM_018249727 X. laevis.S

ESTs (42)

Clone Accession 5'/3' Species Library Anatomy Stage
CN075214 CN075214 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7578512 CX417036 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7598657 CX388194 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607618 CX368237 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA011i14 CR448216 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st88c01 DC188464 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st89c01 DC188726 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8913948 EL826713 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7803250 DR837950 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
xtbs19J23 CN081525 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7744980 DN039050 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7625058 CX403171 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CN075213 CN075213 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst88c01 DC158362 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst89c01 DC158619 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas061g07 BX761986 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7578512 CX417035 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA077a01 CR446511 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA011i14 CR448217 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7607618 CX368236 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598657 CX388193 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625058 CX403170 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7744980 DN039049 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7803250 DR837949 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8913948 EL826714 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs19J23 CN081524 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
PBX0095E06 AW640470 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL411o16ex BP672807 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
PBX0123D11 AW642951 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL490l04ex BP700755 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL035f08 BJ042323 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5515647 CF285706 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL051a23 BJ068885 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL412o16ex BP673146 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL208i07 BJ624443 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
PBX0117G11 AW642445 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL491l04ex BP707583 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL208i07 BJ640980 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL051a23 BJ085788 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL411o16ex BP710822 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL412o16ex BP711099 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL035f08 BJ056284 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15