Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (1) Nucleotides (130) Proteins (26) Interactants (22) Wiki
XB-GENEPAGE-877119

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for otud1 - All

RefSeq mRNAs(2)
Models - Gene (19)
Models - mRNA (19)
mRNAs (2)
ESTs (74)

RefSeq mRNAs (2)

Accession Version Protein Name Length Protein Species
XM_002933134 XM_002933134.5 OTU domain-containing protein 1 2106 bp XP_002933180 X. tropicalis
XM_018267263 XM_018267263.2 OTU domain-containing protein 1 1458 bp XP_018122752 X. laevis.L

Models - Gene (19)

Source Version Model Species
NCBI 10.0 XBXT10g006866 X. tropicalis
NCBI 10.1 XBXL10_1g26872 X. laevis.L
JGI 9.1 Xelaev18032904m.g X. laevis.S
ENSEMBL 10.0 otud1 X. tropicalis
JGI 9.1 Xelaev18030777m.g X. laevis.L
Xenbase 9.1 gene19703 X. tropicalis
Xenbase 9.2 gene4246 X. laevis.L
JGI 7.1 Xetro.F01565 X. tropicalis
JGI 6.0 XeXenL6RMv10005091m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000005910 X. tropicalis
JGI 4.1 gw1.47.30.1 X. tropicalis
JGI 4.1 e_gw1.47.30.1 X. tropicalis
JGI 4.1 e_gw1.47.72.1 X. tropicalis
JGI 4.1 gw1.47.72.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_470035 X. tropicalis
JGI 4.1 estExt_Genewise1.C_470030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_470072 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_470047 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_47000047 X. tropicalis

mRNAs based on gene models(19)

Source Version Model Species
NCBI 10.0 mRNA033983 X. tropicalis
NCBI 10.1 XBmRNA50307 X. laevis.L
ENSEMBL 10.0 ENSXETT00000124627 X. tropicalis
JGI 9.1 Xelaev18030777m X. laevis.L
JGI 9.1 Xelaev18032904m X. laevis.S
Xenbase 9.1 rna41018 X. tropicalis
Xenbase 9.2 rna12362 X. laevis.L
JGI 7.1 Xetro.F01565.1 X. tropicalis
JGI 6.0 XeXenL6RMv10005091m X. laevis.S
JGI 4.1 gw1.47.30.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000013002 X. tropicalis
JGI 4.1 e_gw1.47.30.1 X. tropicalis
JGI 4.1 e_gw1.47.72.1 X. tropicalis
JGI 4.1 gw1.47.72.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_470035 X. tropicalis
JGI 4.1 estExt_Genewise1.C_470030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_470072 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_470047 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_47000047 X. tropicalis

mRNAs from cDNA libraries (2)

Clone Accession Species Library Anatomy Stage
XM_002933134 X. tropicalis
XM_018267263 X. laevis.L

ESTs (74)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas063a02 AL678394 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8907603 EL800844 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8858351 EL822092 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
CAAO9242 CX957444 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO10536 CX959844 5' X. tropicalis NIH_XGC_tropTe5 testis frog
st97j15 DC192126 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st98j15 DC192380 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st115l09 DC193396 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st19b10 DC168294 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st48j19 DC178710 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs15A03 CN078460 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8959524 EL654609 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
CAAO3905 CX934601 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO5062 CX936701 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7845556 DT528351 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7846120 DT528994 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7847481 DT531572 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7848316 DT533094 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7849383 DT534951 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7612365 CX404805 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO7311 CX940772 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO8988 CX956977 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7627420 DR900201 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7561389 CX464568 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535463 CX475996 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7852082 DT392049 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7852717 DT393186 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7854535 DT395981 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7854370 DT396161 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7854682 DT397029 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7091686 CK654036 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTbA037p20 CR419935 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA055f16 CR438314 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA011f23 CR561416 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7698308 CX930257 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7700736 CX934973 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7707126 CX959385 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7757710 DR875822 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
TGas064a02 AL678483 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu079j10 AL785001 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu086e20 AL791875 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu140n14 AL797758 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu112n02 AL801621 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu102c08 AL805456 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas111f19 AL963957 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas120g13 AL970055 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5335707 BQ520664 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5379071 BQ522749 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6989077 CF219765 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TNeu014m23 AL636655 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
CAAO7311 CX940771 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7850481 DT388745 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7852717 DT393185 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
THdA011f23 CR561417 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7535463 CX475995 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas071h09 BX751146 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas140d14 BX764872 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XL074d07 BJ061836 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL061h12 BJ059074 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL209d12 BJ624667 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998F038578 BX843333 5' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
XL444d17ex BP683856 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk141f04ex DC048924 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
PBX0150H02 AW645344 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3380518 BE507234 5' X. laevis.S Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3436627 BF613099 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:3517442 BG264244 5' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:5156235 CA792938 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6867706 CA981293 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XL061h12 BJ077589 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL074d07 BJ080005 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL209d12 BJ641180 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3380518 BE491612 3' X. laevis.S Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3517442 BG413923 3' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14